RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 MTF2Q9Y483 593 aaPredicted RBP11.96□□□□□ -0.49
LPCAT4-208ENST00000569804 CHD6Q8TD26 2715 aa11.96□□□□□ -0.49
LPCAT4-208ENST00000569804 LILRB5O75023 590 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 ITGA4P13612 1032 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 RFX1P22670 979 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 TGM1P22735 817 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 NTHL1P78549 312 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 PPP2R5CQ13362 524 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 KRT32Q14532 448 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 BMP2KLQ5H9B9 411 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 FERMT3Q86UX7 667 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 SKAP1Q86WV1 359 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 PALB2Q86YC2 1186 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 IFNLR1Q8IU57 520 aaPredicted RBP11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 DAGLBQ8NCG7 672 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 ZBTB44Q8NCP5 570 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 PSPC1Q8WXF1 523 aaKnown RBP11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 SLC7A3Q8WY07 619 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 HINFPQ9BQA5 517 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 SLC26A6Q9BXS9 759 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 NXF3Q9H4D5 531 aaKnown RBP11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 UBN1Q9NPG3 1134 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 SH3GLB2Q9NR46 395 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 BMP2KQ9NSY1 1161 aaPredicted RBP11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 CACNG4Q9UBN1 327 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 FBXW11Q9UKB1 542 aa11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 NAP1L2Q9ULW6 460 aaPredicted RBP11.95□□□□□ -0.5
LPCAT4-208ENST00000569804 ZMYM2Q9UBW7 1377 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 KANSL1LA0AUZ9 987 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 SPTLC1O15269 473 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 GAS2O43903 313 aaKnown RBP11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 KINO60870 393 aaKnown RBP11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 HMGB1P09429 215 aaKnown RBP11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 SRGAP2CP0DJJ0 459 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 RFC5P40937 340 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 QARSP47897 775 aaKnown RBP11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 EVCP57679 992 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 PTENP60484 403 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 SPIRE1Q08AE8 756 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 EMC2Q15006 297 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 MLF2Q15773 248 aaPredicted RBP11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 RTP2Q5QGT7 225 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 ELMSAN1Q6PJG2 1045 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 GLYCTKQ8IVS8 523 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 RNF149Q8NC42 400 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 CNNM3Q8NE01 707 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 CPB2Q96IY4 423 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 EPC1Q9H2F5 836 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 NCOA5Q9HCD5 579 aaKnown RBP11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 ADAM28Q9UKQ2 775 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 FBXO4Q9UKT5 387 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 CDH7Q9ULB5 785 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 PCDHA4Q9UN74 947 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 PPME1Q9Y570 386 aa11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 ZFP37Q9Y6Q3 630 aaPredicted RBP11.94□□□□□ -0.5
LPCAT4-208ENST00000569804 CNOT1A5YKK6 2376 aaKnown RBP11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 FSHRP23945 695 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 AXLP30530 894 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 ATXN1P54253 815 aaKnown RBP11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 MBTD1Q05BQ5 628 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 SNW1Q13573 536 aaKnown RBP11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 USP41Q3LFD5 358 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 VARS2Q5ST30 1063 aaKnown RBP11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 NOTUMQ6P988 496 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 POTEHQ6S545 545 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 PRSS55Q6UWB4 352 aaPredicted RBP11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 GRASPQ7Z6J2 395 aaPredicted RBP11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 C4orf19Q8IY42 314 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 RABGGTAQ92696 567 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 FGF13Q92913 245 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 CCDC51Q96ER9 411 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 CEP170P1Q96L14 293 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 AIFM3Q96NN9 605 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 CLSTN3Q9BQT9 956 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 PAAF1Q9BRP4 392 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 OSBPL6Q9BZF3 934 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 CSRNP2Q9H175 543 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 PIDD1Q9HB75 910 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 LTB4R2Q9NPC1 389 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 PRMT8Q9NR22 394 aaPredicted RBP11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 DDX25Q9UHL0 483 aaKnown RBP11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 GIT1Q9Y2X7 761 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 PCDHGA2Q9Y5H1 932 aa11.93□□□□□ -0.5
LPCAT4-208ENST00000569804 ZBTB39O15060 712 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 ADAM12O43184 909 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 B4GALT5O43286 388 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 TDGF1P13385 188 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 ARF4P18085 180 aaPredicted RBP11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 PDIA3P30101 505 aaKnown RBP11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 HOXA9P31269 272 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 YWHABP31946 246 aaKnown RBP11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 NLRP5P59047 1200 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 PRKCQQ04759 706 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 FZD5Q13467 585 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 CAPSQ13938 189 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 PCBP1Q15365 356 aaKnown RBP eCLIP11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 BLIDQ8IZY5 108 aa11.92□□□□□ -0.5
LPCAT4-208ENST00000569804 ZNF687Q8N1G0 1237 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms