RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 NARSO43776 548 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 DGAT1O75907 488 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 LAMP2P13473 410 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 SCNN1GP51170 649 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 GRIK3Q13003 919 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 HAS1Q92839 578 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 ZNF707Q96C28 371 aaPredicted RBP17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 MYADMQ96S97 322 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 EIF2AQ9BY44 585 aaKnown RBP17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 PRKD2Q9BZL6 878 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 SLC2A4RGQ9NR83 387 aa17.52■□□□□ 0.4
HERPUD1-215ENST00000568676 STK36Q9NRP7 1315 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 ANHXE9PGG2 379 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 TGM5O43548 720 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 RFPL2O75678 378 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 LYPLA2O95372 231 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 NCAPH2Q6IBW4 605 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 FUT10Q6P4F1 479 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 RSAD2Q8WXG1 361 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 SHDQ96IW2 340 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 RNF39Q9H2S5 420 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 TBC1D17Q9HA65 648 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 ANKEF1Q9NU02 776 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 RGL1Q9NZL6 768 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 ADAM28Q9UKQ2 775 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 SIT1Q9Y3P8 196 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 SPTBN4Q9H254 2564 aa17.51■□□□□ 0.39
HERPUD1-215ENST00000568676 MBTD1Q05BQ5 628 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 SPIRE1Q08AE8 756 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 SLC27A1Q6PCB7 646 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 LILRA6Q6PI73 481 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 PALB2Q86YC2 1186 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 KCNG4Q8TDN1 519 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 DYDC2Q96IM9 177 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 ZFP42Q96MM3 310 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 AIFM3Q96NN9 605 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 XPNPEP1Q9NQW7 623 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 ARHGEF3Q9NR81 526 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 CA14Q9ULX7 337 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 KCNJ14Q9UNX9 436 aa17.5■□□□□ 0.39
HERPUD1-215ENST00000568676 SF3B1O75533 1304 aaKnown RBP eCLIP17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 ZMYND10O75800 440 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 SLITRK3O94933 977 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 HNRNPA1P09651 372 aaKnown RBP eCLIP17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 ARF4P18085 180 aaPredicted RBP17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 HTR4Q13639 388 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 CTTNQ14247 550 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 AMHR2Q16671 573 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 PDXDC1Q6P996 788 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 PIK3AP1Q6ZUJ8 805 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 TPH2Q8IWU9 490 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 GPR152Q8TDT2 470 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 RIN2Q8WYP3 895 aaPredicted RBP17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 WASF1Q92558 559 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 CPB2Q96IY4 423 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 PRIMPOLQ96LW4 560 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 CCDC43Q96MW1 224 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 GPR62Q9BZJ7 368 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 NXF3Q9H4D5 531 aaKnown RBP17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 MIOSQ9NXC5 875 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 HES2Q9Y543 173 aa17.49■□□□□ 0.39
HERPUD1-215ENST00000568676 VPS13AQ96RL7 3174 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 GVINP1Q7Z2Y8 2422 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 A0A1B0GUA9 196 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 TADA2AO75478 443 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 XRCC6P12956 609 aaKnown RBP eCLIP17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 HOXA9P31269 272 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 ARL2P36404 184 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 CYP4A11Q02928 519 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 STK3Q13188 491 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 CAPSQ13938 189 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 DCLRE1AQ6PJP8 1040 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 GET4Q7L5D6 327 aaPredicted RBP17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 C1orf210Q8IVY1 113 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 GSTCDQ8NEC7 633 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 HSD17B14Q9BPX1 270 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 BRMS1Q9HCU9 246 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 DLGAP2Q9P1A6 1054 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 PCDHA12Q9UN75 941 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 ARID2Q68CP9 1835 aa17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 TDRD15B5MCY1 1934 aaKnown RBP17.48■□□□□ 0.39
HERPUD1-215ENST00000568676 MTCL1Q9Y4B5 1905 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 SPATA31D3P0C874 917 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 FSHRP23945 695 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 STARD6P59095 220 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 ELAVL2Q12926 359 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 HSP90AA2PQ14568 343 aaPredicted RBP17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 LIN9Q5TKA1 542 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 SPATA31D4Q6ZUB0 917 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 MTSS1LQ765P7 747 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 RTL10Q7L3V2 364 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 EIF2AK1Q9BQI3 630 aaKnown RBP17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 PDRG1Q9NUG6 133 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 FBXW11Q9UKB1 542 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 NUMBLQ9Y6R0 609 aa17.47■□□□□ 0.39
HERPUD1-215ENST00000568676 F8W810 466 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms