RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 PADI6Q6TGC4 694 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 C4orf32Q8N8J7 132 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 PRIMPOLQ96LW4 560 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 ZFP42Q96MM3 310 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 RAB34Q9BZG1 259 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 C2orf40Q9H1Z8 148 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 GIT1Q9Y2X7 761 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 ARIH1Q9Y4X5 557 aaPredicted RBP14.24□□□□□ -0.13
TSC2-220ENST00000568238 PLXNA3P51805 1871 aa14.24□□□□□ -0.13
TSC2-220ENST00000568238 C2orf16Q68DN1 1984 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 A0A1B0GUA9 196 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 NRP1O14786 923 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 SSBP05455 408 aaKnown RBP eCLIP14.23□□□□□ -0.13
TSC2-220ENST00000568238 CYP11B2P19099 503 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 OR1G1P47890 313 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 ATP2C1P98194 919 aaPredicted RBP14.23□□□□□ -0.13
TSC2-220ENST00000568238 DSC1Q08554 894 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 PPFIBP1Q86W92 1011 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 CDR2LQ86X02 465 aaPredicted RBP14.23□□□□□ -0.13
TSC2-220ENST00000568238 COLGALT2Q8IYK4 626 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 BSNDQ8WZ55 320 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 FAM122AQ96E09 287 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 NECTIN4Q96NY8 510 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 USP28Q96RU2 1077 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 EMILIN2Q9BXX0 1053 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 ADAM7Q9H2U9 754 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 MARCH5Q9NX47 278 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 LRWD1Q9UFC0 647 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 STK24Q9Y6E0 443 aa14.23□□□□□ -0.13
TSC2-220ENST00000568238 MYH11P35749 1972 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 ZDBF2Q9HCK1 2354 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 NR1I2O75469 434 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 SOD2P04179 222 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 URODP06132 367 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 EPCAMP16422 314 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 SP100P23497 879 aaPredicted RBP14.22□□□□□ -0.13
TSC2-220ENST00000568238 AKAP5P24588 427 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 NAMPTP43490 491 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 PPP2R5AQ15172 486 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 MAPK6Q16659 721 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 FAM187BQ17R55 369 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 TMEM132AQ24JP5 1023 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 RARS2Q5T160 578 aaKnown RBP14.22□□□□□ -0.13
TSC2-220ENST00000568238 IGSF22Q8N9C0 903 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 DEPTORQ8TB45 409 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 SNX29Q8TEQ0 813 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 EDAQ92838 391 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 ZNF396Q96N95 335 aaPredicted RBP14.22□□□□□ -0.13
TSC2-220ENST00000568238 HERC2P3Q9BVR0 1158 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 BHMT2Q9H2M3 363 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 FZD8Q9H461 694 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 MRPL17Q9NRX2 175 aaKnown RBP14.22□□□□□ -0.13
TSC2-220ENST00000568238 CDH22Q9UJ99 828 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 NR2E1Q9Y466 385 aa14.22□□□□□ -0.13
TSC2-220ENST00000568238 LAD1O00515 517 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 N4BP3O15049 544 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 BMP15O95972 392 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 PRKCBP05771 671 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 MTHFRP42898 656 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 NUCB2P80303 420 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 DNM1Q05193 864 aaKnown RBP14.21□□□□□ -0.13
TSC2-220ENST00000568238 GRIK3Q13003 919 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 PRPF4BQ13523 1007 aaKnown RBP14.21□□□□□ -0.13
TSC2-220ENST00000568238 IL17AQ16552 155 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 ECM1Q16610 540 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 DTHD1Q6ZMT9 781 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 HFE2Q6ZVN8 426 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 CABP7Q86V35 215 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 C12orf76Q8N812 135 aaPredicted RBP14.21□□□□□ -0.13
TSC2-220ENST00000568238 SLC22A17Q8WUG5 538 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 CHAMP1Q96JM3 812 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 IFT74Q96LB3 600 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 RIPOR3Q96MK2 946 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 IPO9Q96P70 1041 aaKnown RBP14.21□□□□□ -0.13
TSC2-220ENST00000568238 RPS6KC1Q96S38 1066 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 CCDC113Q9H0I3 377 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 POMKQ9H5K3 350 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 PDZD7Q9H5P4 517 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 DDX19AQ9NUU7 478 aaKnown RBP14.21□□□□□ -0.13
TSC2-220ENST00000568238 TFIP11Q9UBB9 837 aaKnown RBP14.21□□□□□ -0.13
TSC2-220ENST00000568238 PARP2Q9UGN5 583 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 KIAA1024Q9UPX6 916 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 PIEZO1Q92508 2521 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 TRIP11Q15643 1979 aa14.21□□□□□ -0.13
TSC2-220ENST00000568238 MTCL1Q9Y4B5 1905 aaKnown RBP14.2□□□□□ -0.14
TSC2-220ENST00000568238 VWA3AA6NCI4 1184 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 SPDYE4A6NLX3 237 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 C2CD2LO14523 706 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 CNPP09543 421 aaKnown RBP14.2□□□□□ -0.14
TSC2-220ENST00000568238 KLRC2P26717 231 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 MARCKSP29966 332 aaPredicted RBP14.2□□□□□ -0.14
TSC2-220ENST00000568238 PRPHP41219 470 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 GLUD2P49448 558 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 ZXDAP98168 799 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 PDIA5Q14554 519 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 PTPAQ15257 358 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 KIAA1841Q6NSI8 718 aa14.2□□□□□ -0.14
TSC2-220ENST00000568238 GSTCDQ8NEC7 633 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms