RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 KRT2P35908 639 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 AK2P54819 239 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 SPIRE1Q08AE8 756 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 GIT2Q14161 759 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 EMC2Q15006 297 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 MRPL10Q7Z7H8 261 aaKnown RBP10.24□□□□□ -0.77
CDH13-210ENST00000567445 TMEM87AQ8NBN3 555 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 URGCPQ8TCY9 931 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 TCP11Q8WWU5 503 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 TNFRSF25Q93038 417 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 DYDC2Q96IM9 177 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 NECTIN4Q96NY8 510 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 SPSB2Q99619 263 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 ZBP1Q9H171 429 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 NRDE2Q9H7Z3 1164 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 MINDY3Q9H8M7 445 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 BRMS1Q9HCU9 246 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 RGL1Q9NZL6 768 aa10.24□□□□□ -0.77
CDH13-210ENST00000567445 FDPSP14324 419 aaKnown RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 HOXA11P31270 313 aaPredicted RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 SLC11A1P49279 550 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 NHLH1Q02575 133 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 CYP4A11Q02928 519 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 SIGLEC14Q08ET2 396 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 NR5A1Q13285 461 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 CTTNQ14247 550 aaKnown RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 PTPN21Q16825 1174 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 XKR9Q5GH70 373 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 AGMOQ6ZNB7 445 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 FERMT3Q86UX7 667 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 ALYREFQ86V81 257 aaKnown RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 ZNF280BQ86YH2 543 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 RNF149Q8NC42 400 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 BCL7CQ8WUZ0 217 aaPredicted RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 AUTS2Q8WXX7 1259 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 GTF3C6Q969F1 213 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 GBP3Q9H0R5 595 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 RSAD1Q9HA92 442 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 DZANK1Q9NVP4 752 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 KANSL3Q9P2N6 904 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 DNAJB4Q9UDY4 337 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 STK39Q9UEW8 545 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 NR2E1Q9Y466 385 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 CNTNAP2Q9UHC6 1331 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 ZBTB39O15060 712 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 B4GALT3O60512 393 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 ERLIN2O94905 339 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 SLITRK3O94933 977 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 NCLP19338 710 aaKnown RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 SP100P23497 879 aaPredicted RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 MTHFRP42898 656 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 MXD4Q14582 209 aaPredicted RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 PCBP1Q15365 356 aaKnown RBP eCLIP10.23□□□□□ -0.77
CDH13-210ENST00000567445 ME3Q16798 604 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 UBXN11Q5T124 520 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 ZBTB33Q86T24 672 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 TPH2Q8IWU9 490 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 SUGP1Q8IWZ8 645 aaKnown RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 FBXL6Q8N531 539 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 NECAB1Q8N987 351 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 ASIC4Q96FT7 647 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 RIPOR3Q96MK2 946 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 FAM193BQ96PV7 902 aaPredicted RBP10.23□□□□□ -0.77
CDH13-210ENST00000567445 VN1R3Q9BXE9 311 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 POMKQ9H5K3 350 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 CDH22Q9UJ99 828 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 PCDHA12Q9UN75 941 aa10.23□□□□□ -0.77
CDH13-210ENST00000567445 ARID2Q68CP9 1835 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 DDHD2O94830 711 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 LYPLA2O95372 231 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 LARGE1O95461 756 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 BRD1O95696 1058 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 ALDH2P05091 517 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 EPCAMP16422 314 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 AXLP30530 894 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 AFF1P51825 1210 aaKnown RBP10.22□□□□□ -0.77
CDH13-210ENST00000567445 PTENP60484 403 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 TFDP1Q14186 410 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 CALCRLQ16602 461 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 RARS2Q5T160 578 aaKnown RBP10.22□□□□□ -0.77
CDH13-210ENST00000567445 PPFIBP1Q86W92 1011 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 C12orf76Q8N812 135 aaPredicted RBP10.22□□□□□ -0.77
CDH13-210ENST00000567445 SMG8Q8ND04 991 aaKnown RBP10.22□□□□□ -0.77
CDH13-210ENST00000567445 CNNM3Q8NE01 707 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 SLC22A17Q8WUG5 538 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 CCDC51Q96ER9 411 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 PRRX2Q99811 253 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 HSD17B14Q9BPX1 270 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 EIF2AK1Q9BQI3 630 aaKnown RBP10.22□□□□□ -0.77
CDH13-210ENST00000567445 TMEM175Q9BSA9 504 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 TTC12Q9H892 705 aaPredicted RBP10.22□□□□□ -0.77
CDH13-210ENST00000567445 UBN1Q9NPG3 1134 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 XPNPEP1Q9NQW7 623 aa10.22□□□□□ -0.77
CDH13-210ENST00000567445 MYO10Q9HD67 2058 aa10.21□□□□□ -0.77
CDH13-210ENST00000567445 BTBD18B2RXH4 712 aa10.21□□□□□ -0.78
CDH13-210ENST00000567445 C2CD4DB7Z1M9 353 aa10.21□□□□□ -0.78
CDH13-210ENST00000567445 INO80B-WBP1J3KQ70 363 aa10.21□□□□□ -0.78
CDH13-210ENST00000567445 NEMFO60524 1076 aa10.21□□□□□ -0.78
CDH13-210ENST00000567445 TSPAN1O60635 241 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms