RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 SIM1P81133 766 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-216ENST00000567071 DSG1Q02413 1049 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 CREB5Q02930 508 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 BMP2KLQ5H9B9 411 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 PDXDC2PQ6P474 469 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 ZNF280BQ86YH2 543 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 STAG2Q8N3U4 1231 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 FAM200AQ8TCP9 573 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 ELSPBP1Q96BH3 223 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 MSANTD3Q96H12 275 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 PIGSQ96S52 555 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 ZSCAN10Q96SZ4 725 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-216ENST00000567071 FNIP2Q9P278 1114 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 CEP131Q9UPN4 1083 aa10.96□□□□□ -0.65
CAPN3-216ENST00000567071 PRG3Q9Y2Y8 225 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-216ENST00000567071 URB1O60287 2271 aaKnown RBP10.96□□□□□ -0.66
CAPN3-216ENST00000567071 ZMYM6O95789 1325 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 CCDC163A0A0D9SF12 145 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 LNP1A1A4G5 178 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 KHNYNO15037 678 aaKnown RBP10.95□□□□□ -0.66
CAPN3-216ENST00000567071 C22orf31O95567 290 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 DARSP14868 501 aaKnown RBP10.95□□□□□ -0.66
CAPN3-216ENST00000567071 ITGB5P18084 799 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 SDSP20132 328 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 HOXA9P31269 272 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 OR1G1P47890 313 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 CLCN3P51790 818 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 GAS6Q14393 721 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 PABPC1LQ4VXU2 614 aaKnown RBP10.95□□□□□ -0.66
CAPN3-216ENST00000567071 DGKKQ5KSL6 1271 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 LILRA6Q6PI73 481 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 USP17L6PQ6QN14 398 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 GPR65Q8IYL9 337 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 NLRP7Q8WX94 980 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 ING5Q8WYH8 240 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 RILPL2Q969X0 211 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 ZC3H10Q96K80 434 aaKnown RBP10.95□□□□□ -0.66
CAPN3-216ENST00000567071 TRAIPQ9BWF2 469 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 APOL6Q9BWW8 343 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 JADE2Q9NQC1 790 aa10.95□□□□□ -0.66
CAPN3-216ENST00000567071 MRPS23Q9Y3D9 190 aaKnown RBP10.95□□□□□ -0.66
CAPN3-216ENST00000567071 MYH9P35579 1960 aaKnown RBP10.95□□□□□ -0.66
CAPN3-216ENST00000567071 NFASCO94856 1347 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 FAM221BA6H8Z2 402 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 CCL16O15467 120 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 DDHD2O94830 711 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 CAPNS1P04632 268 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 C8AP07357 584 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 FGFR4P22455 802 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 SFPQP23246 707 aaKnown RBP eCLIP10.94□□□□□ -0.66
CAPN3-216ENST00000567071 CCNE1P24864 410 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 GRM2Q14416 872 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 USP41Q3LFD5 358 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 IFIT1BQ5T764 474 aaKnown RBP10.94□□□□□ -0.66
CAPN3-216ENST00000567071 TAS1R1Q7RTX1 841 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 ENAHQ8N8S7 591 aaPredicted RBP10.94□□□□□ -0.66
CAPN3-216ENST00000567071 CSGALNACT1Q8TDX6 532 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 MCRS1Q96EZ8 462 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 UBAC1Q9BSL1 405 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 PLA2G2FQ9BZM2 168 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 ZFP14Q9HCL3 533 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 TRPV5Q9NQA5 729 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 ZNF302Q9NR11 478 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 FAM105AQ9NUU6 356 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 PIN4Q9Y237 131 aaKnown RBP10.94□□□□□ -0.66
CAPN3-216ENST00000567071 UBIAD1Q9Y5Z9 338 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 PTPN13Q12923 2485 aa10.94□□□□□ -0.66
CAPN3-216ENST00000567071 NEDD4P46934 1319 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 NUP205Q92621 2012 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 BCLAF3A2AJT9 711 aaKnown RBP10.93□□□□□ -0.66
CAPN3-216ENST00000567071 PALM3A6NDB9 673 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-216ENST00000567071 CAPN8A6NHC0 703 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 PIK3CDO00329 1044 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 B4GALT3O60512 393 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 GDI1P31150 447 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 KIF5BP33176 963 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 KARSQ15046 597 aaKnown RBP10.93□□□□□ -0.66
CAPN3-216ENST00000567071 ZNF423Q2M1K9 1284 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 TANGO2Q6ICL3 276 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 EFCAB12Q6NXP0 572 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 CHCHD4Q8N4Q1 142 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 ZNF668Q96K58 619 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-216ENST00000567071 MBOAT7Q96N66 472 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 GCOM2Q9BZD3 368 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-216ENST00000567071 CLMPQ9H6B4 373 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 RSAD1Q9HA92 442 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 ZNF334Q9HCZ1 680 aaPredicted RBP10.93□□□□□ -0.66
CAPN3-216ENST00000567071 RBM12Q9NTZ6 932 aaKnown RBP10.93□□□□□ -0.66
CAPN3-216ENST00000567071 MAD2L2Q9UI95 211 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 FBXW11Q9UKB1 542 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 RAXQ9Y2V3 346 aa10.93□□□□□ -0.66
CAPN3-216ENST00000567071 PDCD11Q14690 1871 aaKnown RBP10.93□□□□□ -0.66
CAPN3-216ENST00000567071 CNTNAP2Q9UHC6 1331 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 SPAARA0A1B0GVQ0 90 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 SPDYE3A6NKU9 549 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 ZNF263O14978 683 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 ZNF623O75123 536 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 C1QL1O75973 258 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 ATG7O95352 703 aa10.92□□□□□ -0.66
CAPN3-216ENST00000567071 NTRK1P04629 796 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms