RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 MRPS17Q9Y2R5 130 aaKnown RBP18.84■□□□□ 0.61
CDH3-205ENST00000566808 NOTCH4Q99466 2003 aa18.84■□□□□ 0.61
CDH3-205ENST00000566808 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.83■□□□□ 0.6
CDH3-205ENST00000566808 TMEM150BA6NC51 233 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 F8W810 466 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 MSH4O15457 936 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 ZBTB43O43298 467 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 NRLP54845 237 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 PFKFB3Q16875 520 aaPredicted RBP18.83■□□□□ 0.6
CDH3-205ENST00000566808 LIN9Q5TKA1 542 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 FUT10Q6P4F1 479 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 CCDC12Q8WUD4 166 aaPredicted RBP18.83■□□□□ 0.6
CDH3-205ENST00000566808 DDX1Q92499 740 aaKnown RBP18.83■□□□□ 0.6
CDH3-205ENST00000566808 B3GALT6Q96L58 329 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 KXD1Q9BQD3 176 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 COLEC11Q9BWP8 271 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 TEKT3Q9BXF9 490 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 C6orf50Q9HD87 102 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 COL4A3BPQ9Y5P4 624 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 ASPMQ8IZT6 3477 aa18.83■□□□□ 0.6
CDH3-205ENST00000566808 SPEGQ15772 3267 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 ARID2Q68CP9 1835 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 ARL5CA6NH57 179 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 STBD1O95210 358 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 RETP07949 1114 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 TDGF1P13385 188 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 ITGA4P13612 1032 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 HOXA9P31269 272 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 HOXA11P31270 313 aaPredicted RBP18.82■□□□□ 0.6
CDH3-205ENST00000566808 MLH1P40692 756 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 NTHL1P78549 312 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 MTAPQ13126 283 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 PPP2R5DQ14738 602 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 ZNF852Q6ZMS4 543 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 SRGAP1Q7Z6B7 1085 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 CELF5Q8N6W0 485 aaKnown RBP18.82■□□□□ 0.6
CDH3-205ENST00000566808 SLC5A5Q92911 643 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 SH2D3AQ9BRG2 576 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 IER2Q9BTL4 223 aa18.82■□□□□ 0.6
CDH3-205ENST00000566808 COL4A2P08572 1712 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 SLC27A2O14975 620 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 XYLBO75191 536 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 RPL17P18621 184 aaKnown RBP18.81■□□□□ 0.6
CDH3-205ENST00000566808 SCNN1GP51170 649 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 ADCY1Q08828 1119 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 PRR23CQ6ZRP0 262 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 MIER3Q7Z3K6 550 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 SMG8Q8ND04 991 aaKnown RBP18.81■□□□□ 0.6
CDH3-205ENST00000566808 GAD1Q99259 594 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 GPR62Q9BZJ7 368 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 ADAM28Q9UKQ2 775 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 IPPQ9Y573 584 aa18.81■□□□□ 0.6
CDH3-205ENST00000566808 GREB1Q4ZG55 1949 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 GOLGA8AA7E2F4 631 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 GOLGA8BA8MQT2 603 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 ADAMTS3O15072 1205 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 FOXD2O60548 495 aaPredicted RBP18.8■□□□□ 0.6
CDH3-205ENST00000566808 C8AP07357 584 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 POU2F2P09086 479 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 GNA11P29992 359 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 COL9A2Q14055 689 aaPredicted RBP18.8■□□□□ 0.6
CDH3-205ENST00000566808 LPAL2Q16609 132 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 PPM1LQ5SGD2 360 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 NPAS3Q8IXF0 933 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 CCDC51Q96ER9 411 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 ZFP42Q96MM3 310 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 CHRDQ9H2X0 955 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 MINDY3Q9H8M7 445 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 SEMA4GQ9NTN9 838 aa18.8■□□□□ 0.6
CDH3-205ENST00000566808 RALYQ9UKM9 306 aaKnown RBP18.8■□□□□ 0.6
CDH3-205ENST00000566808 SF3B1O75533 1304 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDH3-205ENST00000566808 ERLIN2O94905 339 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 PMLP29590 882 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 SHC2P98077 582 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 CSRP2Q16527 193 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 ITFG1Q8TB96 612 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 BICD2Q8TD16 824 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 PSPC1Q8WXF1 523 aaKnown RBP18.79■□□□□ 0.6
CDH3-205ENST00000566808 SLC7A3Q8WY07 619 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 DNASE1L2Q92874 299 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 CCDC136Q96JN2 1154 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 KCNH3Q9ULD8 1083 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 ZMYM2Q9UBW7 1377 aa18.79■□□□□ 0.6
CDH3-205ENST00000566808 SPAG17Q6Q759 2223 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 VWA8A3KMH1 1905 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 ECI2O75521 394 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 PSMD10O75832 226 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 KCNA4P22459 653 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 RCAN1P53805 252 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 FZD5Q13467 585 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 PCBP1Q15365 356 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDH3-205ENST00000566808 CREB3L3Q68CJ9 461 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 MAMSTRQ6ZN01 415 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 PRR23BQ6ZRT6 265 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 ANO5Q75V66 913 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 HEBP1Q9NRV9 189 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 BRPF3Q9ULD4 1205 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 POLIQ9UNA4 740 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 TICRRQ7Z2Z1 1910 aa18.78■□□□□ 0.6
CDH3-205ENST00000566808 DDX11L8A8MPP1 907 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms