RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 MXRA7P84157 204 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 KRT81Q14533 505 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 DHX38Q92620 1227 aaKnown RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 OTUD5Q96G74 571 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 TARS2Q9BW92 718 aaKnown RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 MOV10L1Q9BXT6 1211 aaKnown RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 TBX20Q9UMR3 447 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 SYNJ2BP-COX16A0A087WUM0 186 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 GOLGA8MH3BSY2 632 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 WNT10BO00744 389 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 TLR2O60603 784 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 RARRES1P49788 294 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 PPP2R2AP63151 447 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 MAPK6Q16659 721 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 SRLQ86TD4 932 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 CDR2LQ86X02 465 aaPredicted RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 ADPGKQ9BRR6 497 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 WNT8AQ9H1J5 351 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 ISCUQ9H1K1 167 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 COX16Q9P0S2 106 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 HACL1Q9UJ83 578 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 H7C0C1 242 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 PPP1R37O75864 691 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 P4HA1P13674 534 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 HSD17B3P37058 310 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 NPTX2P47972 431 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 ATP5OP48047 213 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 FAM133BQ5BKY9 247 aaKnown RBP12.39□□□□□ -0.43
CDH1-210ENST00000566612 C1orf186Q6ZWK4 172 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 JAMLQ86YT9 394 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 RFX6Q8HWS3 928 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 KAT5Q92993 513 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 SALL4Q9UJQ4 1053 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
CDH1-210ENST00000566612 LDHAP00338 332 aaKnown RBP12.38□□□□□ -0.43
CDH1-210ENST00000566612 PPP2R5DQ14738 602 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 C6orf118Q5T5N4 469 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 LRRC31Q6UY01 552 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 CEP128Q6ZU80 1094 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 TSEN2Q8NCE0 465 aaKnown RBP12.38□□□□□ -0.43
CDH1-210ENST00000566612 TAS1R2Q8TE23 839 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 KIAA1586Q9HCI6 787 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 PSD3Q9NYI0 1048 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 TXNDC16Q9P2K2 825 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 PCSK1NQ9UHG2 260 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 PFASO15067 1338 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 CYP3A7-CYP3A51PA0A087WV96 503 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 GMNCA6NCL1 334 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 PJA2O43164 708 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 VIL1P09327 827 aaKnown RBP12.38□□□□□ -0.43
CDH1-210ENST00000566612 VCAM1P19320 739 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 CYP3A7P24462 503 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 ANXA13P27216 316 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 DLG4P78352 724 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 CDO1Q16878 200 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 NLRP14Q86W24 1093 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 RNF149Q8NC42 400 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 TMEM117Q9H0C3 514 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 EIF3HO15372 352 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDH1-210ENST00000566612 TFDP1Q14186 410 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 CCDC6Q16204 474 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 XKR3Q5GH77 459 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 MUM1L1Q5H9M0 696 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 FOXR1Q6PIV2 292 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 SLC47A2Q86VL8 602 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 SLC5A5Q92911 643 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 FAM81BQ96LP2 452 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 TTYH3Q9C0H2 523 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 ASTN1O14525 1302 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 LRP6O75581 1613 aa12.38□□□□□ -0.43
CDH1-210ENST00000566612 FAM187AA6NFU0 413 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 PSMD10O75832 226 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 HNRNPH3P31942 346 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 MAN1A1P33908 653 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 STAT5BP51692 787 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 BASP1P80723 227 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 KRT17Q04695 432 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 ZNF568Q3ZCX4 644 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 NUGGCQ68CJ6 796 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 SPATS2Q86XZ4 545 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 IL31RAQ8NI17 732 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 PSPC1Q8WXF1 523 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 C18orf8Q96DM3 657 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 HEXIM2Q96MH2 286 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 PDCD2LQ9BRP1 358 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 ERP44Q9BS26 406 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 KLHL14Q9P2G3 628 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 EXOC1LA0A1B0GW35 172 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 ZNF131P52739 623 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 MTM1Q13496 603 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 TATDN1Q6P1N9 297 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 SRRM1Q8IYB3 904 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 TMEM35BQ8NCS4 154 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 TCP11Q8WWU5 503 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 CALR3Q96L12 384 aaKnown RBP12.37□□□□□ -0.43
CDH1-210ENST00000566612 HSD17B14Q9BPX1 270 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 GANQ9H2C0 597 aa12.37□□□□□ -0.43
CDH1-210ENST00000566612 SAYSD1Q9NPB0 183 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms