RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 PLPP4Q5VZY2 271 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 ADGRD2Q7Z7M1 963 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 ZNF280BQ86YH2 543 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 EFHBQ8N7U6 833 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 DNAJB4Q9UDY4 337 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 TNFSF13BQ9Y275 285 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 FAN1Q9Y2M0 1017 aa21.84■■□□□ 1.09
CMTM3-211ENST00000565922 A0A0C4DFX4 3053 aa21.83■■□□□ 1.09
CMTM3-211ENST00000565922 DDHD2O94830 711 aa21.83■■□□□ 1.09
CMTM3-211ENST00000565922 ZSCAN22P10073 491 aaPredicted RBP21.83■■□□□ 1.09
CMTM3-211ENST00000565922 AKAP5P24588 427 aa21.83■■□□□ 1.09
CMTM3-211ENST00000565922 SLC11A1P49279 550 aa21.83■■□□□ 1.09
CMTM3-211ENST00000565922 NDUFV1P49821 464 aa21.83■■□□□ 1.09
CMTM3-211ENST00000565922 SCNN1GP51170 649 aa21.83■■□□□ 1.09
CMTM3-211ENST00000565922 DDX53Q86TM3 631 aaKnown RBP21.83■■□□□ 1.09
CMTM3-211ENST00000565922 ZFP42Q96MM3 310 aa21.83■■□□□ 1.09
CMTM3-211ENST00000565922 UHRF1Q96T88 793 aaPredicted RBP21.83■■□□□ 1.09
CMTM3-211ENST00000565922 BLOC1S4Q9NUP1 217 aa21.83■■□□□ 1.09
CMTM3-211ENST00000565922 XIRP2A4UGR9 3374 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 TTLL13PA6NNM8 815 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 SFI1A8K8P3 1242 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 SLC16A4O15374 487 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 FAM13AO94988 1023 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 F13A1P00488 732 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 ABCD1P33897 745 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 DDIT3P35638 169 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 AFF1P51825 1210 aaKnown RBP21.82■■□□□ 1.08
CMTM3-211ENST00000565922 ADAM15Q13444 863 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 DHX8Q14562 1220 aaKnown RBP21.82■■□□□ 1.08
CMTM3-211ENST00000565922 DUSP6Q16828 381 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 NT5DC1Q5TFE4 455 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 CCDC73Q6ZRK6 1079 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 RBM23Q86U06 439 aaKnown RBP21.82■■□□□ 1.08
CMTM3-211ENST00000565922 EPSTI1Q96J88 318 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 REEP2Q9BRK0 252 aa21.82■■□□□ 1.08
CMTM3-211ENST00000565922 H3BQ06 376 aaPredicted RBP21.81■■□□□ 1.08
CMTM3-211ENST00000565922 NRP1O14786 923 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 PPP6R2O75170 966 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 TBCAO75347 108 aaKnown RBP21.81■■□□□ 1.08
CMTM3-211ENST00000565922 YEATS4O95619 227 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 EDN1P05305 212 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 OR1G1P47890 313 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 DSC1Q08554 894 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 MCM6Q14566 821 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 ZNF568Q3ZCX4 644 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 ARSHQ5FYA8 562 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 SPECC1Q5M775 1068 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 RRAGBQ5VZM2 374 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 ATL3Q6DD88 541 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 PTCRAQ6ISU1 281 aaPredicted RBP21.81■■□□□ 1.08
CMTM3-211ENST00000565922 TMEM173Q86WV6 379 aaPredicted RBP21.81■■□□□ 1.08
CMTM3-211ENST00000565922 COLGALT2Q8IYK4 626 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 VPS52Q8N1B4 723 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 LINC00301Q8NCQ3 95 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 CLIC6Q96NY7 704 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 ACO2Q99798 780 aaKnown RBP21.81■■□□□ 1.08
CMTM3-211ENST00000565922 ZBP1Q9H171 429 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 PARVGQ9HBI0 331 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 SNTG2Q9NY99 539 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 PCDHGC5Q9Y5F6 944 aa21.81■■□□□ 1.08
CMTM3-211ENST00000565922 SPTBN5Q9NRC6 3674 aaKnown RBP21.81■■□□□ 1.08
CMTM3-211ENST00000565922 SPTLC2O15270 562 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 RECQL4O94761 1208 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 CA8P35219 290 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 GTF2F1P35269 517 aaKnown RBP eCLIP21.8■■□□□ 1.08
CMTM3-211ENST00000565922 LTBRP36941 435 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 EEF1DP3Q658K8 133 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 MRPL43Q8N983 215 aaKnown RBP21.8■■□□□ 1.08
CMTM3-211ENST00000565922 TMEM87AQ8NBN3 555 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 TMEM161BQ8NDZ6 487 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.8■■□□□ 1.08
CMTM3-211ENST00000565922 KCNN1Q92952 543 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 KLK14Q9P0G3 267 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 IRAK3Q9Y616 596 aa21.8■■□□□ 1.08
CMTM3-211ENST00000565922 PDCD11Q14690 1871 aaKnown RBP21.79■■□□□ 1.08
CMTM3-211ENST00000565922 NPHP3-ACAD11A0A0J9YXS1 232 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 B4GALT3O60512 393 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 TBX10O75333 385 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 CTSAP10619 480 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 ZNF131P52739 623 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 YARSP54577 528 aaKnown RBP21.79■■□□□ 1.08
CMTM3-211ENST00000565922 NCKAP1LP55160 1127 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 ZPBP2Q6X784 338 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 USP49Q70CQ1 688 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 TAS1R3Q7RTX0 852 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 SPRYD3Q8NCJ5 442 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 GSTCDQ8NEC7 633 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 LRRC15Q8TF66 581 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 TCHPQ9BT92 498 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 CCDC94Q9BW85 323 aaPredicted RBP21.79■■□□□ 1.08
CMTM3-211ENST00000565922 COLEC11Q9BWP8 271 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 TOPORSQ9NS56 1045 aaPredicted RBP21.79■■□□□ 1.08
CMTM3-211ENST00000565922 MIOSQ9NXC5 875 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 CD207Q9UJ71 328 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 SSX2IPQ9Y2D8 614 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 USP20Q9Y2K6 914 aa21.79■■□□□ 1.08
CMTM3-211ENST00000565922 GRXCR2A6NFK2 248 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 PER2O15055 1255 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 LINC01565O15544 149 aa21.78■■□□□ 1.08
CMTM3-211ENST00000565922 THP07101 528 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms