RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 HOXA6P31267 233 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 CCDC6Q16204 474 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 PABPC1LQ4VXU2 614 aaKnown RBP10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 DAB2IPQ5VWQ8 1189 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 TANGO2Q6ICL3 276 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 RTL10Q7L3V2 364 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 HEATR3Q7Z4Q2 680 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 NPAS3Q8IXF0 933 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 TMTC2Q8N394 836 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 GATA6Q92908 595 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 MCRS1Q96EZ8 462 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 TRMT61BQ9BVS5 477 aaKnown RBP10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 TMEM121BQ9BXQ6 578 aaPredicted RBP10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 RIC8AQ9NPQ8 531 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 TRPV5Q9NQA5 729 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 VPS45Q9NRW7 570 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 WASF3Q9UPY6 502 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 PCDHGA5Q9Y5G8 931 aa10.16□□□□□ -0.78
VPS9D1-205ENST00000565452 TADA2AO75478 443 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 EPN2O95208 641 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 ZIC2O95409 532 aaPredicted RBP10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 C8AP07357 584 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 POU2F2P09086 479 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 ITGA4P13612 1032 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 CEACAM1P13688 526 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 SREBF1P36956 1147 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 ZNF252P-AS1Q0IIN9 211 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 LRRC32Q14392 662 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 SOWAHCQ53LP3 525 aaPredicted RBP10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 FUT10Q6P4F1 479 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 C1orf228Q6PIY5 440 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 WDR5BQ86VZ2 330 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 RHPN2Q8IUC4 686 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 PLEKHM2Q8IWE5 1019 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 ZNF654Q8IZM8 581 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 NCOA7Q8NI08 942 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 IGDCC4Q8TDY8 1250 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 B3GALT6Q96L58 329 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 SCNM1Q9BWG6 230 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 GPR62Q9BZJ7 368 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 GLT8D2Q9H1C3 349 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 ZFP14Q9HCL3 533 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 SUCLA2Q9P2R7 463 aaPredicted RBP10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 FBXW11Q9UKB1 542 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 C2orf16Q68DN1 1984 aa10.15□□□□□ -0.78
VPS9D1-205ENST00000565452 DOCK8Q8NF50 2099 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 IGF2RP11717 2491 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 GCN1Q92616 2671 aaKnown RBP10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 DSPP15924 2871 aaKnown RBP10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 MIA3Q5JRA6 1907 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 hCG_1642624A0A1W2PR95 340 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 ARL5CA6NH57 179 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 WDR64B1ANS9 1081 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 FAM86B1E9PN63 330 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 K7ESF4 209 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 GIPC1O14908 333 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 PLEKHA8P1O95397 391 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 FAM86B2P0C5J1 330 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 CALM1P0DP23 149 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 CALM2P0DP24 149 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 CALM3P0DP25 149 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 NCLP19338 710 aaKnown RBP10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 RAP1GAPP47736 663 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 MLLT6P55198 1093 aaPredicted RBP10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 DSC1Q08554 894 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 PTGDRQ13258 359 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 PLA2G2CQ5R387 149 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 AXDND1Q5T1B0 1012 aaPredicted RBP10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 SH3PXD2AQ5TCZ1 1133 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 NFXL1Q6ZNB6 911 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 CMTR1Q8N1G2 835 aaKnown RBP10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 CCDC82Q8N4S0 544 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 ING5Q8WYH8 240 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 PGBD1Q96JS3 809 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 ANO3Q9BYT9 981 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 ZNF334Q9HCZ1 680 aaPredicted RBP10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 DISC1Q9NRI5 854 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 AGPAT5Q9NUQ2 364 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 DNMT3BQ9UBC3 853 aaKnown RBP10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 ADAM28Q9UKQ2 775 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 PIAS3Q9Y6X2 628 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 LAMA4Q16363 1823 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 EVPLQ92817 2033 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 F5P12259 2224 aa10.14□□□□□ -0.79
VPS9D1-205ENST00000565452 C4orf47A7E2U8 309 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 ZNF862O60290 1169 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 CYP3A4P08684 503 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 PTPN2P17706 415 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 CCNE1P24864 410 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 ADCY7P51828 1080 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 NAPAP54920 295 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 PRKCEQ02156 737 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 NCBP1Q09161 790 aaKnown RBP10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 AP3B2Q13367 1082 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 DRP2Q13474 957 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 GAS6Q14393 721 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 TARBP2Q15633 366 aaKnown RBP10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 DGKKQ5KSL6 1271 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 PDXDC1Q6P996 788 aa10.13□□□□□ -0.79
VPS9D1-205ENST00000565452 PRSS55Q6UWB4 352 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms