RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 TESMINQ9Y4I5 508 aa5.68□□□□□ -1.5
PALB2-203ENST00000565038 MFAP3LO75121 409 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 PHF2O75151 1096 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 PTPN7P35236 360 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 IGBP1P78318 339 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 CRHR2Q13324 411 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 PUM1Q14671 1186 aaKnown RBP eCLIP5.67□□□□□ -1.5
PALB2-203ENST00000565038 NRN1LQ496H8 165 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 FAM180AQ6UWF9 173 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 GGNQ86UU5 652 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 PNMA8AQ86V59 439 aaPredicted RBP5.67□□□□□ -1.5
PALB2-203ENST00000565038 THEMISQ8N1K5 641 aaPredicted RBP5.67□□□□□ -1.5
PALB2-203ENST00000565038 ST8SIA2Q92186 375 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 DPF2Q92785 391 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 CEP95Q96GE4 821 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 UHRF1Q96T88 793 aaPredicted RBP5.67□□□□□ -1.5
PALB2-203ENST00000565038 LDAHQ9H6V9 325 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 TUBD1Q9UJT1 453 aa5.67□□□□□ -1.5
PALB2-203ENST00000565038 C1QTNF3-AMACRE9PGA6 284 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 WNT10BO00744 389 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 CYP27B1O15528 508 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 NDUFS2O75306 463 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 IPO13O94829 963 aaKnown RBP5.66□□□□□ -1.5
PALB2-203ENST00000565038 GASTP01350 101 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 NCLP19338 710 aaKnown RBP5.66□□□□□ -1.5
PALB2-203ENST00000565038 C5AR1P21730 350 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 CCND1P24385 295 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 ACRV1P26436 265 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 ECHS1P30084 290 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 CRHR1P34998 444 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 PER3P56645 1201 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 RRP1BQ14684 758 aaKnown RBP5.66□□□□□ -1.5
PALB2-203ENST00000565038 ODF1Q14990 250 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 SEPT2Q15019 361 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 ZXDCQ2QGD7 858 aaPredicted RBP5.66□□□□□ -1.5
PALB2-203ENST00000565038 MFSD14BQ5SR56 506 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 ANKS6Q68DC2 871 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 C1orf210Q8IVY1 113 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 PQLC1Q8N2U9 271 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 MDGA1Q8NFP4 955 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 OR7D4Q8NG98 312 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 OR2I1PQ8NGU4 316 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 NRG4Q8WWG1 115 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 STON2Q8WXE9 905 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 BORCS6Q96GS4 357 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 LSM14BQ9BX40 385 aaKnown RBP5.66□□□□□ -1.5
PALB2-203ENST00000565038 GPR87Q9BY21 358 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 HDAC5Q9UQL6 1122 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 MRFAP1Q9Y605 127 aa5.66□□□□□ -1.5
PALB2-203ENST00000565038 SREBF1P36956 1147 aa5.65□□□□□ -1.5
PALB2-203ENST00000565038 RABGGTBP53611 331 aa5.65□□□□□ -1.5
PALB2-203ENST00000565038 CNGB1Q14028 1251 aaPredicted RBP5.65□□□□□ -1.5
PALB2-203ENST00000565038 C1QL3Q5VWW1 255 aa5.65□□□□□ -1.5
PALB2-203ENST00000565038 APBB1IPQ7Z5R6 666 aaPredicted RBP5.65□□□□□ -1.5
PALB2-203ENST00000565038 FAM83AQ86UY5 434 aa5.65□□□□□ -1.5
PALB2-203ENST00000565038 TRMT2AQ8IZ69 625 aaKnown RBP5.65□□□□□ -1.5
PALB2-203ENST00000565038 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.65□□□□□ -1.5
PALB2-203ENST00000565038 IL17DQ8TAD2 202 aa5.65□□□□□ -1.5
PALB2-203ENST00000565038 HOXB13Q92826 284 aaPredicted RBP5.65□□□□□ -1.5
PALB2-203ENST00000565038 TEKT5Q96M29 485 aa5.65□□□□□ -1.5
PALB2-203ENST00000565038 CPEB1Q9BZB8 566 aaKnown RBP5.65□□□□□ -1.5
PALB2-203ENST00000565038 BCO1Q9HAY6 547 aa5.65□□□□□ -1.5
PALB2-203ENST00000565038 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 KLRG2A4D1S0 409 aaPredicted RBP5.64□□□□□ -1.51
PALB2-203ENST00000565038 HSP90B1P14625 803 aaKnown RBP5.64□□□□□ -1.51
PALB2-203ENST00000565038 MAN2A2P49641 1150 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 DGCR2P98153 550 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 RNF207Q6ZRF8 634 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 PDZD4Q76G19 769 aaPredicted RBP5.64□□□□□ -1.51
PALB2-203ENST00000565038 STAG1Q8WVM7 1258 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 MNTQ99583 582 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 PDCD2LQ9BRP1 358 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 SPON1Q9HCB6 807 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 DDX56Q9NY93 547 aaKnown RBP5.64□□□□□ -1.51
PALB2-203ENST00000565038 MYRFQ9Y2G1 1151 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 SIK3Q9Y2K2 1263 aa5.64□□□□□ -1.51
PALB2-203ENST00000565038 AMHP03971 560 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 SLC6A9P48067 706 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 PTTG1IPP53801 180 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 KIF23Q02241 960 aaPredicted RBP5.63□□□□□ -1.51
PALB2-203ENST00000565038 MGAT2Q10469 447 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 CSRP2Q16527 193 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 EFCAB2Q5VUJ9 269 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 OR52N2Q8NGI0 321 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.63□□□□□ -1.51
PALB2-203ENST00000565038 SLC35B2Q8TB61 432 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 CCHCR1Q8TD31 782 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 SSH1Q8WYL5 1049 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 RAB24Q969Q5 203 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 KRTAP9-3Q9BYQ3 159 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 SENP6Q9GZR1 1112 aaPredicted RBP5.63□□□□□ -1.51
PALB2-203ENST00000565038 XDHP47989 1333 aa5.63□□□□□ -1.51
PALB2-203ENST00000565038 GOLGA6L6A8MZA4 724 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 PRR5-ARHGAP8B1AHC4 643 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 MATN3O15232 486 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 ENDOD1O94919 500 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 C1SP09871 688 aa5.62□□□□□ -1.51
PALB2-203ENST00000565038 FPR1P21462 350 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms