RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 EIF4BP23588 611 aaKnown RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 ACOT2P49753 483 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 CDK7P50613 346 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 DLG4P78352 724 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 MCL1Q07820 350 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 PTK7Q13308 1070 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 TRIM71Q2Q1W2 868 aaKnown RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 SEZ6Q53EL9 994 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 DCAF17Q5H9S7 520 aaPredicted RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 ZBTB41Q5SVQ8 909 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 MPZL3Q6UWV2 235 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 INTS8Q75QN2 995 aaKnown RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 RSPH3Q86UC2 560 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 U2AF1L4Q8WU68 220 aaKnown RBP11.08□□□□□ -0.64
SMG1-208ENST00000563448 MFSD14AQ96MC6 490 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 FAM213AQ9BRX8 229 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 TCHPQ9BT92 498 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 PDZD7Q9H5P4 517 aa11.08□□□□□ -0.64
SMG1-208ENST00000563448 A0A1W2PQC6 194 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 CHRNA1P02708 482 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 AFPP02771 609 aaKnown RBP11.07□□□□□ -0.64
SMG1-208ENST00000563448 TRIM49P0CI25 452 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 TRIM49CP0CI26 452 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 HARSP12081 509 aaKnown RBP11.07□□□□□ -0.64
SMG1-208ENST00000563448 KRT13P13646 458 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 VAMP7P51809 220 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 PPP2R3AQ06190 1150 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 CYP24A1Q07973 514 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 KCNMA1Q12791 1236 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 TBX2Q13207 712 aaPredicted RBP11.07□□□□□ -0.64
SMG1-208ENST00000563448 TMEM132AQ24JP5 1023 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 ZNF568Q3ZCX4 644 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 C1orf220Q5T0J3 134 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 FKBP15Q5T1M5 1219 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 TCERG1LQ5VWI1 586 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 SPECC1LQ69YQ0 1117 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 ERGIC2Q96RQ1 377 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 TRPV6Q9H1D0 765 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 CDT1Q9H211 546 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 KIAA1586Q9HCI6 787 aa11.07□□□□□ -0.64
SMG1-208ENST00000563448 ITIH6Q6UXX5 1313 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 A0A1B0GUA9 196 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 ZNF233A6NK53 670 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 M0QZ92 97 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 OGTO15294 1046 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 TFRCP02786 760 aaKnown RBP11.06□□□□□ -0.64
SMG1-208ENST00000563448 RPLP2P05387 115 aaKnown RBP11.06□□□□□ -0.64
SMG1-208ENST00000563448 CTSHP09668 335 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 HOXA11P31270 313 aaPredicted RBP11.06□□□□□ -0.64
SMG1-208ENST00000563448 THPOP40225 353 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 TNFSF9P41273 254 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 KLK7P49862 253 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 WNT7BP56706 349 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 NOLC1Q14978 699 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMG1-208ENST00000563448 PCBP1Q15365 356 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMG1-208ENST00000563448 SYCP1Q15431 976 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 CATSPER4Q7RTX7 472 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 PARD3BQ8TEW8 1205 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 SENP6Q9GZR1 1112 aaPredicted RBP11.06□□□□□ -0.64
SMG1-208ENST00000563448 IMPACTQ9P2X3 320 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 NOD1Q9Y239 953 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 NOC2LQ9Y3T9 749 aaKnown RBP11.06□□□□□ -0.64
SMG1-208ENST00000563448 SFPQP23246 707 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMG1-208ENST00000563448 CCDC186Q7Z3E2 898 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 FAM228AQ86W67 206 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 CEP120Q8N960 986 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 SEZ6LQ9BYH1 1024 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 OSBPL7Q9BZF2 842 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 SIK3Q9Y2K2 1263 aa11.06□□□□□ -0.64
SMG1-208ENST00000563448 BRCA2P51587 3418 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 TDRD15B5MCY1 1934 aaKnown RBP11.05□□□□□ -0.64
SMG1-208ENST00000563448 ALPK3Q96L96 1907 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 LRRIQ3A6PVS8 624 aaPredicted RBP11.05□□□□□ -0.64
SMG1-208ENST00000563448 PTMAP06454 111 aaKnown RBP11.05□□□□□ -0.64
SMG1-208ENST00000563448 MCF2P10911 925 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 FMO5P49326 533 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 PPP3CAQ08209 521 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 CBWD6Q4V339 395 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 CBWD3Q5JTY5 395 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 FAM26DQ5JW98 314 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 CBWD5Q5RIA9 395 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 THNSL1Q8IYQ7 743 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 TMC2Q8TDI7 906 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 CCDC127Q96BQ5 260 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
SMG1-208ENST00000563448 MMRN2Q9H8L6 949 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 AGPAT5Q9NUQ2 364 aa11.05□□□□□ -0.64
SMG1-208ENST00000563448 CPSF3Q9UKF6 684 aaKnown RBP11.05□□□□□ -0.64
SMG1-208ENST00000563448 GOLGA6L6A8MZA4 724 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 CD4P01730 458 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 AXLP30530 894 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 GJA8P48165 433 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 ENPEPQ07075 957 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 GOLGA8FQ08AF8 430 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 GOLGA8DPQ0D2H9 430 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 ARID5BQ14865 1188 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 PSMD6Q15008 389 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 ZNF618Q5T7W0 954 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 FAM126BQ8IXS8 530 aa11.04□□□□□ -0.64
SMG1-208ENST00000563448 TMEM192Q8IY95 271 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms