RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 PIN4Q9Y237 131 aaKnown RBP7.34□□□□□ -1.23
LINC02249-202ENST00000562624 CCDC88AQ3V6T2 1871 aa7.34□□□□□ -1.24
LINC02249-202ENST00000562624 BCORQ6W2J9 1755 aa7.34□□□□□ -1.24
LINC02249-202ENST00000562624 GMNCA6NCL1 334 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 PPP6R2O75170 966 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 CIB2O75838 187 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 RPN1P04843 607 aaKnown RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 FGFR4P22455 802 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 PPP1R2P41236 205 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 GUCY2DQ02846 1103 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 FUT2Q10981 343 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 TRPC3Q13507 836 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 CUL4BQ13620 913 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 SFR1Q86XK3 245 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 REM2Q8IYK8 340 aaPredicted RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 WHAMMQ8TF30 809 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 CLEC4DQ8WXI8 215 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 HVCN1Q96D96 273 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 VTA1Q9NP79 307 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 TMEM39AQ9NV64 488 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 EXOC7Q9UPT5 735 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 MAFGO15525 162 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 N4BP1O75113 896 aaKnown RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 PPP1R37O75864 691 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 RPL13P26373 211 aaKnown RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 CCND3P30281 292 aaPredicted RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 TFAMQ00059 246 aaKnown RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 SF3A3Q12874 501 aaKnown RBP eCLIP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 TAF12Q16514 161 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 MAPK6Q16659 721 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 CTU1Q7Z7A3 348 aaKnown RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 PAF1Q8N7H5 531 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 ACRBPQ8NEB7 543 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 DNAJB3Q8WWF6 145 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 NAP1L3Q99457 506 aaPredicted RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 EPN3Q9H201 632 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 AGO4Q9HCK5 861 aaKnown RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 CHCHD3Q9NX63 227 aaKnown RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 RNF14Q9UBS8 474 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 ADGRG1Q9Y653 693 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 STK24Q9Y6E0 443 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 DUOX1Q9NRD9 1551 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 SDK1Q7Z5N4 2213 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 EML1O00423 815 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 WNT7AO00755 349 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 CEP104O60308 925 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 YARSP54577 528 aaKnown RBP7.33□□□□□ -1.24
LINC02249-202ENST00000562624 ARPP19P56211 112 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 RAPGEF1Q13905 1077 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 PTPN21Q16825 1174 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 SHC4Q6S5L8 630 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 SHCBP1Q8NEM2 672 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 MMS19Q96T76 1030 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 RIT2Q99578 217 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 KATNAL1Q9BW62 490 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 PLVAPQ9BX97 442 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 SLC40A1Q9NP59 571 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 RNF19AQ9NV58 838 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 ETAA1Q9NY74 926 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 SYNPO2Q9UMS6 1093 aa7.33□□□□□ -1.24
LINC02249-202ENST00000562624 C17orf102A2RUQ5 167 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 MED24O75448 989 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 SYN1P17600 705 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 NMT1P30419 496 aaKnown RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 MRPS9P82933 396 aaKnown RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 SKIV2LQ15477 1246 aaKnown RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 DENND2CQ68D51 928 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 IQSEC1Q6DN90 963 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 OTOP1Q7RTM1 612 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 PIK3R5Q8WYR1 880 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 OSMRQ99650 979 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 HINFPQ9BQA5 517 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 UNC93B1Q9H1C4 597 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 KIF9Q9HAQ2 790 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 ZMYND8Q9ULU4 1186 aaPredicted RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 ZNF536O15090 1300 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 HGSO14964 777 aaPredicted RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 ASGR1P07306 291 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 GHRP10912 638 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 PAX7P23759 505 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 RNASE9P60153 205 aaKnown RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 IFRD2Q12894 506 aaPredicted RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 CALCOCO2Q13137 446 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 KCNA10Q16322 511 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 USP37Q86T82 979 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 CCDC60Q8IWA6 550 aaPredicted RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 HACE1Q8IYU2 909 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 MSANTD4Q8NCY6 345 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 NELFBQ8WX92 580 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 NOC4LQ9BVI4 516 aaKnown RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 INTS9Q9NV88 658 aaKnown RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 CTTNBP2NLQ9P2B4 639 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 HPCAL4Q9UM19 191 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 ZNF831Q5JPB2 1677 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 PRRC2BQ5JSZ5 2229 aaKnown RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 SASH3O75995 380 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 HEXIM1O94992 359 aaKnown RBP7.32□□□□□ -1.24
LINC02249-202ENST00000562624 GJB1P08034 283 aa7.32□□□□□ -1.24
LINC02249-202ENST00000562624 TGFB3P10600 412 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms