RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 COASYQ13057 564 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 CSPP1Q1MSJ5 1256 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 ZNF568Q3ZCX4 644 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 HERC4Q5GLZ8 1057 aaPredicted RBP18.34■□□□□ 0.53
CLK3-207ENST00000562389 MPZL3Q6UWV2 235 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 MAP4K3Q8IVH8 894 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 URGCPQ8TCY9 931 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 GDPD5Q8WTR4 605 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 P2RX5Q93086 422 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 IPO9Q96P70 1041 aaKnown RBP18.34■□□□□ 0.53
CLK3-207ENST00000562389 CDT1Q9H211 546 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 MRPL44Q9H9J2 332 aaKnown RBP18.34■□□□□ 0.53
CLK3-207ENST00000562389 AAASQ9NRG9 546 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 HCSTQ9UBK5 93 aa18.34■□□□□ 0.53
CLK3-207ENST00000562389 GOLGA6L4A6NEF3 574 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 H3BNC9 293 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 RFXAPO00287 272 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 LPXNO60711 386 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 TOM1L1O75674 476 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 MCF2P10911 925 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 AFMP43652 599 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 SPOUT1Q5T280 376 aaKnown RBP18.33■□□□□ 0.52
CLK3-207ENST00000562389 UNC13DQ70J99 1090 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 COLGALT1Q8NBJ5 622 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 PAGE5Q96GU1 130 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 C11orf84Q9BUA3 381 aaPredicted RBP18.33■□□□□ 0.52
CLK3-207ENST00000562389 APOL6Q9BWW8 343 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 STRA6Q9BX79 667 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 TBC1D13Q9NVG8 400 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 KANSL3Q9P2N6 904 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 INPP5FQ9Y2H2 1132 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 STXBP5LQ9Y2K9 1186 aa18.33■□□□□ 0.52
CLK3-207ENST00000562389 CHD9Q3L8U1 2897 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 ARL5CA6NH57 179 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 MYL1P05976 194 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 FOSL2P15408 326 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 POU3F3P20264 500 aaPredicted RBP18.32■□□□□ 0.52
CLK3-207ENST00000562389 AKAP5P24588 427 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 MLH1P40692 756 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 GPM6BQ13491 265 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 ALCAMQ13740 583 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 ADGRE1Q14246 886 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 TPRNQ4KMQ1 711 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 ZC2HC1CQ53FD0 456 aaPredicted RBP18.32■□□□□ 0.52
CLK3-207ENST00000562389 BICD1Q96G01 975 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 GAD1Q99259 594 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 SNTG2Q9NY99 539 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 TBC1D7Q9P0N9 293 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 PARP2Q9UGN5 583 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 PCDHB12Q9Y5F1 795 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 PLXNA4Q9HCM2 1894 aa18.32■□□□□ 0.52
CLK3-207ENST00000562389 ATG2AQ2TAZ0 1938 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 PVALEFA0A1B0GWK0 134 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 CARNS1A5YM72 827 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 HNRNPDLO14979 420 aaKnown RBP18.31■□□□□ 0.52
CLK3-207ENST00000562389 RECQL4O94761 1208 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 ZNF202O95125 648 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 GCNT3O95395 438 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 CASP1P29466 404 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 GRM5P41594 1212 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 LIG4P49917 911 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 MCL1Q07820 350 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 EHHADHQ08426 723 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 CUL4BQ13620 913 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 NOLC1Q14978 699 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLK3-207ENST00000562389 L1TD1Q5T7N2 865 aaKnown RBP18.31■□□□□ 0.52
CLK3-207ENST00000562389 KRBA2Q6ZNG9 492 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 GRAMD1CQ8IYS0 662 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 TMEM87AQ8NBN3 555 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 ZBTB45Q96K62 511 aaPredicted RBP18.31■□□□□ 0.52
CLK3-207ENST00000562389 TCHPQ9BT92 498 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 BLZF1Q9H2G9 400 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 LMCD1Q9NZU5 365 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 ANKFY1Q9P2R3 1169 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 PCDHB13Q9Y5F0 798 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 CITO14578 2027 aa18.31■□□□□ 0.52
CLK3-207ENST00000562389 TRIP11Q15643 1979 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 CLDN3O15551 220 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 GTPBP6O43824 516 aaPredicted RBP18.3■□□□□ 0.52
CLK3-207ENST00000562389 MYBP10242 640 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 SCNN1GP51170 649 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 AFF1P51825 1210 aaKnown RBP18.3■□□□□ 0.52
CLK3-207ENST00000562389 CASP5P51878 434 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 RNASELQ05823 741 aaKnown RBP18.3■□□□□ 0.52
CLK3-207ENST00000562389 KCNT2Q6UVM3 1135 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 ZBTB33Q86T24 672 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 CEP120Q8N960 986 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 KLHL23Q8NBE8 558 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 GSTCDQ8NEC7 633 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 ZFP42Q96MM3 310 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 ZNF558Q96NG5 402 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 RPS6KC1Q96S38 1066 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 FGFBP2Q9BYJ0 223 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 NRDE2Q9H7Z3 1164 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 CHD7Q9P2D1 2997 aa18.3■□□□□ 0.52
CLK3-207ENST00000562389 PDCD11Q14690 1871 aaKnown RBP18.29■□□□□ 0.52
CLK3-207ENST00000562389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.29■□□□□ 0.52
CLK3-207ENST00000562389 ZC3H11AO75152 810 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLK3-207ENST00000562389 POMCP01189 267 aa18.29■□□□□ 0.52
CLK3-207ENST00000562389 ITGB1P05556 798 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms