RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PRKAB2O43741 272 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 PAPLNO95428 1278 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 GLUD1P00367 558 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 EIF2S3P41091 472 aaKnown RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 LSM11P83369 360 aaKnown RBP eCLIP7.47□□□□□ -1.21
HERC1-208ENST00000560462 TMEM62Q0P6H9 643 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 TRIP6Q15654 476 aaKnown RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 RCSD1Q6JBY9 416 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 KCNV1Q6PIU1 500 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 Q6ZS52 159 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 TMEM173Q86WV6 379 aaPredicted RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 NANOS1Q8WY41 292 aaKnown RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 PRKD2Q9BZL6 878 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 FAM49AQ9H0Q0 323 aaPredicted RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 PRDM9Q9NQV7 894 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 RBM12Q9NTZ6 932 aaKnown RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 ZDHHC7Q9NXF8 308 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 HEMK1Q9Y5R4 338 aaPredicted RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 DNMT3AQ9Y6K1 912 aaPredicted RBP7.47□□□□□ -1.21
HERC1-208ENST00000560462 FRMPD4Q14CM0 1322 aa7.47□□□□□ -1.21
HERC1-208ENST00000560462 PLXNB3Q9ULL4 1909 aa7.46□□□□□ -1.21
HERC1-208ENST00000560462 DNHD1Q96M86 4753 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 ECI2O75521 394 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 ADH1BP00325 375 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 SSBP05455 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
HERC1-208ENST00000560462 ADH1AP07327 375 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 UBA1P22314 1058 aaKnown RBP7.46□□□□□ -1.22
HERC1-208ENST00000560462 FAM189BP81408 668 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 RHDQ02161 417 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 SLC9C2Q5TAH2 1124 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 SYDE2Q5VT97 1194 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 HDDC3Q8N4P3 179 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 SREK1Q8WXA9 508 aaKnown RBP7.46□□□□□ -1.22
HERC1-208ENST00000560462 IGSF21Q96ID5 467 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 DRC1Q96MC2 740 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 TAAR1Q96RJ0 339 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 RMDN3Q96TC7 470 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 KIF2CQ99661 725 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 CELF4Q9BZC1 486 aaKnown RBP7.46□□□□□ -1.22
HERC1-208ENST00000560462 ANTXR1Q9H6X2 564 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 ARMT1Q9H993 441 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 ANO2Q9NQ90 1003 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 MRPL17Q9NRX2 175 aaKnown RBP7.46□□□□□ -1.22
HERC1-208ENST00000560462 RNF19AQ9NV58 838 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 PNMA2Q9UL42 364 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 HDAC5Q9UQL6 1122 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 APOBEC2Q9Y235 224 aaKnown RBP7.46□□□□□ -1.22
HERC1-208ENST00000560462 PIAS3Q9Y6X2 628 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 F5P12259 2224 aa7.46□□□□□ -1.22
HERC1-208ENST00000560462 MYH4Q9Y623 1939 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 MBLAC1A4D2B0 266 aaPredicted RBP7.45□□□□□ -1.22
HERC1-208ENST00000560462 TERTO14746 1132 aaKnown RBP7.45□□□□□ -1.22
HERC1-208ENST00000560462 SRGAP3O43295 1099 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 ZC3H11AO75152 810 aaKnown RBP eCLIP7.45□□□□□ -1.22
HERC1-208ENST00000560462 RECKO95980 971 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 SPATA31D3P0C874 917 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 PDE6AP16499 860 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 EIF2AK2P19525 551 aaKnown RBP7.45□□□□□ -1.22
HERC1-208ENST00000560462 CCNE1P24864 410 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 CXADRP78310 365 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 SP2Q02086 613 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 PPFIA1Q13136 1202 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 GRIK4Q16099 956 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 ARHGEF16Q5VV41 709 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 CTR9Q6PD62 1173 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 SPATA31D4Q6ZUB0 917 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 TOGARAM2Q6ZUX3 1019 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 CYP2U1Q7Z449 544 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 GRASPQ7Z6J2 395 aaPredicted RBP7.45□□□□□ -1.22
HERC1-208ENST00000560462 ZNF280BQ86YH2 543 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 STK11IPQ8N1F8 1099 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 HELQQ8TDG4 1101 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 HDAC7Q8WUI4 952 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 WNT2BQ93097 391 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 MED8Q96G25 268 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 C1QTNF2Q9BXJ5 285 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 NUSAP1Q9BXS6 441 aaKnown RBP7.45□□□□□ -1.22
HERC1-208ENST00000560462 MRPL9Q9BYD2 267 aaKnown RBP7.45□□□□□ -1.22
HERC1-208ENST00000560462 PLEKHA4Q9H4M7 779 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 BRD9Q9H8M2 597 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 POLMQ9NP87 494 aaPredicted RBP7.45□□□□□ -1.22
HERC1-208ENST00000560462 SMC4Q9NTJ3 1288 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 STK39Q9UEW8 545 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 SEPT3Q9UH03 358 aa7.45□□□□□ -1.22
HERC1-208ENST00000560462 EVLQ9UI08 416 aaPredicted RBP7.45□□□□□ -1.22
HERC1-208ENST00000560462 EXTL3O43909 919 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 RPS6KA5O75582 802 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 FAM13AO94988 1023 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 NR3C2P08235 984 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 TGFB3P10600 412 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 MYF5P13349 255 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 ENGP17813 658 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 GBP1P32455 592 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 SLC16A2P36021 539 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 KARSQ15046 597 aaKnown RBP7.44□□□□□ -1.22
HERC1-208ENST00000560462 TRIM61Q5EBN2 209 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 DGKKQ5KSL6 1271 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 ODR4Q5SWX8 454 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 MARCH8Q5T0T0 291 aa7.44□□□□□ -1.22
HERC1-208ENST00000560462 UTP14CQ5TAP6 766 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms