RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 HERC2P3Q9BVR0 1158 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 APOL6Q9BWW8 343 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 EIF2AQ9BY44 585 aaKnown RBP15.55■□□□□ 0.08
TPM1-223ENST00000560445 NT5C3AQ9H0P0 336 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 S1PR5Q9H228 398 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 FZD8Q9H461 694 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 C17orf75Q9HAS0 396 aa15.55■□□□□ 0.08
TPM1-223ENST00000560445 FAM86C2PA6NEL3 165 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 MEIS3P2A8K0S8 358 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 ACKR2O00590 384 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 SLC26A4O43511 780 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 NPTXRO95502 500 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 PRKCBP05771 671 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 PLA2G5P39877 138 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 GLUD2P49448 558 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 DSC1Q08554 894 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 DMP1Q13316 513 aaPredicted RBP15.54■□□□□ 0.08
TPM1-223ENST00000560445 SYCE2Q6PIF2 218 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 TMEM173Q86WV6 379 aaPredicted RBP15.54■□□□□ 0.08
TPM1-223ENST00000560445 COLGALT2Q8IYK4 626 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 PLCD3Q8N3E9 789 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 CDK5RAP3Q96JB5 506 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 BHMT2Q9H2M3 363 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 NXF3Q9H4D5 531 aaKnown RBP15.54■□□□□ 0.08
TPM1-223ENST00000560445 PARP2Q9UGN5 583 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 MUTYHQ9UIF7 546 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 KIAA1024Q9UPX6 916 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 SMC3Q9UQE7 1217 aa15.54■□□□□ 0.08
TPM1-223ENST00000560445 SF3B1O75533 1304 aaKnown RBP eCLIP15.53■□□□□ 0.089e-6■■■■■ 68.9
TPM1-223ENST00000560445 DDHD2O94830 711 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 SCNN1GP51170 649 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 ELAVL2Q12926 359 aaKnown RBP15.53■□□□□ 0.08
TPM1-223ENST00000560445 ARL6IP4Q66PJ3 421 aaKnown RBP15.53■□□□□ 0.08
TPM1-223ENST00000560445 PDXDC1Q6P996 788 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 TDRD5Q8NAT2 981 aaKnown RBP15.53■□□□□ 0.08
TPM1-223ENST00000560445 TMX3Q96JJ7 454 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 FBXL18Q96ME1 805 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 PRRX2Q99811 253 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 C11orf16Q9NQ32 467 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 GPRC5CQ9NQ84 441 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 DDX19AQ9NUU7 478 aaKnown RBP15.53■□□□□ 0.08
TPM1-223ENST00000560445 KCND2Q9NZV8 630 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 USTQ9Y2C2 406 aa15.53■□□□□ 0.08
TPM1-223ENST00000560445 PRG3Q9Y2Y8 225 aaPredicted RBP15.53■□□□□ 0.08
TPM1-223ENST00000560445 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
TPM1-223ENST00000560445 K7ERI5 159 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 B4GALT5O43286 388 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 PDCP20941 246 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 SCP2P22307 547 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 RBM10P98175 930 aaKnown RBP15.52■□□□□ 0.08
TPM1-223ENST00000560445 TUSC3Q13454 348 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 USP41Q3LFD5 358 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 C15orf39Q6ZRI6 1047 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 SUGP1Q8IWZ8 645 aaKnown RBP15.52■□□□□ 0.08
TPM1-223ENST00000560445 SLC22A17Q8WUG5 538 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 HDAC7Q8WUI4 952 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 ACSF2Q96CM8 615 aaPredicted RBP15.52■□□□□ 0.08
TPM1-223ENST00000560445 TSHZ2Q9NRE2 1034 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 TOPORSQ9NS56 1045 aaPredicted RBP15.52■□□□□ 0.08
TPM1-223ENST00000560445 HES2Q9Y543 173 aa15.52■□□□□ 0.08
TPM1-223ENST00000560445 H0YCG3 227 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 TADA2AO75478 443 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 GLUD1P00367 558 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 THP07101 528 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 GJB2P29033 226 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 YARSP54577 528 aaKnown RBP15.51■□□□□ 0.07
TPM1-223ENST00000560445 ATP2C1P98194 919 aaPredicted RBP15.51■□□□□ 0.07
TPM1-223ENST00000560445 PTPN21Q16825 1174 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 RARS2Q5T160 578 aaKnown RBP15.51■□□□□ 0.07
TPM1-223ENST00000560445 TRIM67Q6ZTA4 783 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 CCDC149Q6ZUS6 474 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 OTOP3Q7RTS5 596 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 BMP8AQ7Z5Y6 402 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 UBALD2Q8IYN6 164 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 C4orf32Q8N8J7 132 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 BCL7CQ8WUZ0 217 aaPredicted RBP15.51■□□□□ 0.07
TPM1-223ENST00000560445 STAMQ92783 540 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 AK8Q96MA6 479 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 ZFP42Q96MM3 310 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 KLHL5Q96PQ7 755 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 RHOBTB2Q9BYZ6 727 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 PDZD7Q9H5P4 517 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.51■□□□□ 0.07
TPM1-223ENST00000560445 ADAM28Q9UKQ2 775 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 PCDHB6Q9Y5E3 794 aa15.51■□□□□ 0.07
TPM1-223ENST00000560445 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.51■□□□□ 0.07
TPM1-223ENST00000560445 CCDC169A6NNP5 214 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 SSBP05455 408 aaKnown RBP eCLIP15.5■□□□□ 0.07
TPM1-223ENST00000560445 CNPP09543 421 aaKnown RBP15.5■□□□□ 0.07
TPM1-223ENST00000560445 LIG1P18858 919 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 AKAP5P24588 427 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 ABCD1P33897 745 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 CLCN4P51793 760 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 SMTNP53814 917 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 ZXDAP98168 799 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 DSG1Q02413 1049 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 SIGLEC14Q08ET2 396 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 MTMR3Q13615 1198 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 HSP90AA2PQ14568 343 aaPredicted RBP15.5■□□□□ 0.07
TPM1-223ENST00000560445 ATF7IP2Q5U623 682 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms