RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 EIF2AQ9BY44 585 aaKnown RBP15.04■□□□□ -0
SMAD3-214ENST00000560402 RHOBTB2Q9BYZ6 727 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 TUFT1Q9NNX1 390 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 MARCH5Q9NX47 278 aa15.04■□□□□ -0
SMAD3-214ENST00000560402 CACNA1HO95180 2353 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 ARL5CA6NH57 179 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 BTBD18B2RXH4 712 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 ZBTB39O15060 712 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 BRD1O95696 1058 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 C1RP00736 705 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 CNPP09543 421 aaKnown RBP15.03■□□□□ -0
SMAD3-214ENST00000560402 ARF4P18085 180 aaPredicted RBP15.03■□□□□ -0
SMAD3-214ENST00000560402 AVPR2P30518 371 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 OR1G1P47890 313 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 GLUD2P49448 558 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 AFF1P51825 1210 aaKnown RBP15.03■□□□□ -0
SMAD3-214ENST00000560402 VCPP55072 806 aaKnown RBP15.03■□□□□ -0
SMAD3-214ENST00000560402 TCF15Q12870 199 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 SAFBQ15424 915 aaKnown RBP eCLIP15.03■□□□□ -0
SMAD3-214ENST00000560402 SLC27A1Q6PCB7 646 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 OTOP3Q7RTS5 596 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 CCDC83Q8IWF9 413 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 C12orf76Q8N812 135 aaPredicted RBP15.03■□□□□ -0
SMAD3-214ENST00000560402 MCPH1Q8NEM0 835 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 ASAP3Q8TDY4 903 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 CPB2Q96IY4 423 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 PRIMPOLQ96LW4 560 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 MTMR9Q96QG7 549 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 RPS6KC1Q96S38 1066 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 GAD1Q99259 594 aa15.03■□□□□ -0
SMAD3-214ENST00000560402 POLR3FQ9H1D9 316 aaPredicted RBP15.03■□□□□ -0
SMAD3-214ENST00000560402 PRG3Q9Y2Y8 225 aaPredicted RBP15.03■□□□□ -0
SMAD3-214ENST00000560402 USO1O60763 962 aaKnown RBP15.02■□□□□ -0
SMAD3-214ENST00000560402 SSBP05455 408 aaKnown RBP eCLIP15.02■□□□□ -0
SMAD3-214ENST00000560402 WEE2P0C1S8 567 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 GLRA2P23416 452 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 TXKP42681 527 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 SCNN1GP51170 649 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 CREMQ03060 361 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 GRIK3Q13003 919 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 IER5LQ5T953 404 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 TMC5Q6UXY8 1006 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 ZBTB8OSQ8IWT0 167 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 HDAC7Q8WUI4 952 aa15.02■□□□□ -0
SMAD3-214ENST00000560402 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.02■□□□□ -0
SMAD3-214ENST00000560402 PRMT7Q9NVM4 692 aaPredicted RBP15.02■□□□□ -0
SMAD3-214ENST00000560402 POTEMA6NI47 508 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 JAK2O60674 1132 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 EFEMP2O95967 443 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 GLUD1P00367 558 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 DSG1Q02413 1049 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
SMAD3-214ENST00000560402 ERMNQ8TAM6 284 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 STAMQ92783 540 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 LLPHQ9BRT6 129 aaKnown RBP15.01□□□□□ -0.01
SMAD3-214ENST00000560402 COLEC11Q9BWP8 271 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 C2orf40Q9H1Z8 148 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 NXF3Q9H4D5 531 aaKnown RBP15.01□□□□□ -0.01
SMAD3-214ENST00000560402 RXFP1Q9HBX9 757 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 MAN1C1Q9NR34 630 aa15.01□□□□□ -0.01
SMAD3-214ENST00000560402 LRRIQ4A6NIV6 560 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 C2CD2LO14523 706 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 DTNBO60941 627 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 PAPLNO95428 1278 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 MUTP22033 750 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 GSE1Q14687 1217 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 FAM187BQ17R55 369 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 HAUS3Q68CZ6 603 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 PIGOQ8TEQ8 1089 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 ZFP42Q96MM3 310 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 POLR3CQ9BUI4 534 aaPredicted RBP15□□□□□ -0.01
SMAD3-214ENST00000560402 RNF39Q9H2S5 420 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 HES2Q9Y543 173 aa15□□□□□ -0.01
SMAD3-214ENST00000560402 DOCK8Q8NF50 2099 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 CLUHO75153 1309 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 SF3B1O75533 1304 aaKnown RBP eCLIP14.99□□□□□ -0.018e-6■■■■■ 107
SMAD3-214ENST00000560402 A0A1B0GUA9 196 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 WNT7AO00755 349 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 N4BP3O15049 544 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 TEX28O15482 410 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 B4GALT5O43286 388 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 GALR2O43603 387 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-214ENST00000560402 STX6O43752 255 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 TRAK2O60296 914 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 NPTXRO95502 500 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 PDGFBP01127 241 aaPredicted RBP14.99□□□□□ -0.01
SMAD3-214ENST00000560402 ASGR2P07307 311 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 OR52Z1P0C646 297 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 GJB2P29033 226 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 MCM7P33993 719 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 HMGN5P82970 282 aaKnown RBP14.99□□□□□ -0.01
SMAD3-214ENST00000560402 USP41Q3LFD5 358 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 KIAA0319Q5VV43 1072 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 KANK3Q6NY19 840 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 FUT10Q6P4F1 479 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 NACC1Q96RE7 527 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 APOL6Q9BWW8 343 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 TMEM60Q9H2L4 133 aa14.99□□□□□ -0.01
SMAD3-214ENST00000560402 PLEKHA4Q9H4M7 779 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms