RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 DRC1Q96MC2 740 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 NTPCRQ9BSD7 190 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 CCSER1Q9C0I3 900 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 S1PR5Q9H228 398 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 KCNH6Q9H252 994 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 NRDE2Q9H7Z3 1164 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 POLD4Q9HCU8 107 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 KANSL3Q9P2N6 904 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 FBXO2Q9UK22 296 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 SRPRBQ9Y5M8 271 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 ZMYM2Q9UBW7 1377 aa16.74■□□□□ 0.27
SNRPA1-210ENST00000560383 TTLL13PA6NNM8 815 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 PRKCBP05771 671 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 PLA2G4BP0C869 781 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 ITGA4P13612 1032 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 NPTX2P47972 431 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 AFF1P51825 1210 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 RNASELQ05823 741 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 ZRSR1Q15695 479 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 SYCE2Q6PIF2 218 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 DDX53Q86TM3 631 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 URGCPQ8TCY9 931 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 LRRC15Q8TF66 581 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 EDAQ92838 391 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 CALML4Q96GE6 196 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 IGSF21Q96ID5 467 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 USP28Q96RU2 1077 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 PLIN2Q99541 437 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 ZBP1Q9H171 429 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 ARHGAP28Q9P2N2 729 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 GIT1Q9Y2X7 761 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 HCFC2Q9Y5Z7 792 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 ZNF318Q5VUA4 2279 aa16.73■□□□□ 0.27
SNRPA1-210ENST00000560383 MUC6Q6W4X9 2439 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 TECTAO75443 2155 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 B4GALT3O60512 393 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 EDN1P05305 212 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 GALTP07902 379 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 CTSAP10619 480 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 NASPP49321 788 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 PEX3P56589 373 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 PRPF4BQ13523 1007 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 SLC39A14Q15043 492 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 TMEM173Q86WV6 379 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 CDR2LQ86X02 465 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 HACE1Q8IYU2 909 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 SPIRE2Q8WWL2 714 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 KIFC3Q9BVG8 833 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 TRIM6Q9C030 488 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 NXF3Q9H4D5 531 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 PDZD7Q9H5P4 517 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 TMEM134Q9H6X4 195 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 BLOC1S4Q9NUP1 217 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 KCNG1Q9UIX4 513 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 INPP5FQ9Y2H2 1132 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 HES2Q9Y543 173 aa16.72■□□□□ 0.27
SNRPA1-210ENST00000560383 PHLPP2Q6ZVD8 1323 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 ARL5CA6NH57 179 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 NT5C1B-RDH14C9J2C7 533 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 N4BP3O15049 544 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 DDHD2O94830 711 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 NPTXRO95502 500 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 MARCKSP29966 332 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 ITIH3Q06033 890 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 DMP1Q13316 513 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 ARSHQ5FYA8 562 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 LLGL2Q6P1M3 1020 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 BMP8AQ7Z5Y6 402 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 ZNF280BQ86YH2 543 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 VPS52Q8N1B4 723 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 GSTCDQ8NEC7 633 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 KCNN1Q92952 543 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 NECTIN4Q96NY8 510 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 TMEM175Q9BSA9 504 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 DZANK1Q9NVP4 752 aa16.71■□□□□ 0.27
SNRPA1-210ENST00000560383 DENND4AQ7Z401 1863 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 CCDC169A6NNP5 214 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 K7ERI5 159 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 CLASP2O75122 1294 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 SSBP05455 408 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 PLS3P13797 630 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 PLCG1P19174 1290 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 SLC11A1P49279 550 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 DSC1Q08554 894 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 KARSQ15046 597 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 NT5DC1Q5TFE4 455 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 HFE2Q6ZVN8 426 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 USP49Q70CQ1 688 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 TAS1R3Q7RTX0 852 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 BCL7CQ8WUZ0 217 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 RAD54LQ92698 747 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 EPSTI1Q96J88 318 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 GAD1Q99259 594 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 KMT5AQ9NQR1 393 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 DNAJB4Q9UDY4 337 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 ODF2LQ9ULJ1 636 aa16.7■□□□□ 0.26
SNRPA1-210ENST00000560383 TDRD15B5MCY1 1934 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms