RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 TPM3P06753 285 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 TPM2P07951 284 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 DARSP14868 501 aaKnown RBP7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 PROZP22891 400 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 UBXN1Q04323 297 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 PRPF4BQ13523 1007 aaKnown RBP7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 PKN2Q16513 984 aaKnown RBP7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 PTPN21Q16825 1174 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 ATF7IP2Q5U623 682 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 TSHZ1Q6ZSZ6 1077 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 CBWD2Q8IUF1 395 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 VSTM4Q8IW00 320 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 DRC7Q8IY82 874 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 RDH13Q8NBN7 331 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 SPC24Q8NBT2 197 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 WNT8BQ93098 351 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 ARMC5Q96C12 935 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 SAAL1Q96ER3 474 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 ZNF333Q96JL9 665 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 SCLT1Q96NL6 688 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 GCOM2Q9BZD3 368 aaPredicted RBP7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 NDST4Q9H3R1 872 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 PTPRHQ9HD43 1115 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 RYDENQ9NUL5 291 aaKnown RBP7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 TNFSF13BQ9Y275 285 aa7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.9□□□□□ -1.14
HMBOX1-214ENST00000560357 CNTNAP2Q9UHC6 1331 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 A0A0U1RQG5 324 aaPredicted RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 A0A1W2PQC6 194 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 PES1O00541 588 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 CLDN3O15551 220 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 EXTL3O43909 919 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 FAM189A1O60320 539 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 TSPAN1O60635 241 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 LDHAP00338 332 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 RPLP2P05387 115 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 ADRB2P07550 413 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 ARF4P18085 180 aaPredicted RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 FGFR4P22455 802 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 EIF4BP23588 611 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 CDK7P50613 346 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 CRYBB1P53674 252 aaPredicted RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 MRPS6P82932 125 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 PPP2R3AQ06190 1150 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 MCL1Q07820 350 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 KCNH2Q12809 1159 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 BFSP1Q12934 665 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 TBX2Q13207 712 aaPredicted RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 PTK7Q13308 1070 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 SNX17Q15036 470 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 SNRNP35Q16560 246 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 PTGISQ16647 500 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 TRIM71Q2Q1W2 868 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 EEF1DP3Q658K8 133 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 MPZL3Q6UWV2 235 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 CRELD2Q6UXH1 353 aaPredicted RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 INTS8Q75QN2 995 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 TMC6Q7Z403 805 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 RSPH3Q86UC2 560 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 GPD1LQ8N335 351 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 PLEKHO2Q8TD55 490 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 KHSRPQ92945 711 aaKnown RBP eCLIP7.89□□□□□ -1.153e-6■■□□□ 11.9
HMBOX1-214ENST00000560357 SLC35C1Q96A29 364 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 PRIMPOLQ96LW4 560 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 MFSD14AQ96MC6 490 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 ERGIC2Q96RQ1 377 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 OSMRQ99650 979 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 CELF4Q9BZC1 486 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 CRISPLD2Q9H0B8 497 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 KIAA1586Q9HCI6 787 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 STARD7Q9NQZ5 370 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 TRMT13Q9NUP7 481 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 ANKFY1Q9P2R3 1169 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 IMPACTQ9P2X3 320 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 AGO2Q9UKV8 859 aaKnown RBP7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 GINS2Q9Y248 185 aa7.89□□□□□ -1.15
HMBOX1-214ENST00000560357 ITIH6Q6UXX5 1313 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 A0A1B0GUA9 196 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 ZNF233A6NK53 670 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 ARVCFO00192 962 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 OGTO15294 1046 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 SGPL1O95470 568 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 CHRNA1P02708 482 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 AFPP02771 609 aaKnown RBP7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 TFRCP02786 760 aaKnown RBP7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 KRT13P13646 458 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 HOXA11P31270 313 aaPredicted RBP7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 MATR3P43243 847 aaKnown RBP eCLIP7.88□□□□□ -1.156e-7■■■■□ 23.5
HMBOX1-214ENST00000560357 ACOT2P49753 483 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 VAMP7P51809 220 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 DLG4P78352 724 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 FOXK1P85037 733 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 ENPEPQ07075 957 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 CYP24A1Q07973 514 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 MGAT3Q09327 533 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 KCNMA1Q12791 1236 aa7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 HSP90AA2PQ14568 343 aaPredicted RBP7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 PCBP1Q15365 356 aaKnown RBP eCLIP7.88□□□□□ -1.15
HMBOX1-214ENST00000560357 SYCP1Q15431 976 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms