RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 CYP2J2P51589 502 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 CRYBB1P53674 252 aaPredicted RBP12.21□□□□□ -0.45
HMG20A-206ENST00000558845 RBL2Q08999 1139 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 BFSP1Q12934 665 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 PTK7Q13308 1070 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 KYAT1Q16773 422 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 HS1BP3Q53T59 392 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 CEP135Q66GS9 1140 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 SPECC1LQ69YQ0 1117 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 MPZL3Q6UWV2 235 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 FAM43BQ6ZT52 329 aaPredicted RBP12.21□□□□□ -0.45
HMG20A-206ENST00000558845 USP37Q86T82 979 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 GPD1LQ8N335 351 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 DNAJB3Q8WWF6 145 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 NLRP7Q8WX94 980 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 POMGNT1Q8WZA1 660 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 SLC35C1Q96A29 364 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 BICD1Q96G01 975 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 EEF2KMTQ96G04 330 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 MFSD14AQ96MC6 490 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 TARS2Q9BW92 718 aaKnown RBP12.21□□□□□ -0.45
HMG20A-206ENST00000558845 VPS16Q9H269 839 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 MINDY3Q9H8M7 445 aa12.21□□□□□ -0.45
HMG20A-206ENST00000558845 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.21□□□□□ -0.45
HMG20A-206ENST00000558845 TISP43B9A030 160 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 P4HA2O15460 535 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 CLDN3O15551 220 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 TEX33O43247 280 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 FAM189A1O60320 539 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 ZMYND10O75800 440 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 IQCF3P0C7M6 154 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 HSPA1AP0DMV8 641 aaKnown RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 HSPA1BP0DMV9 641 aaKnown RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 EIF4BP23588 611 aaKnown RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 GSDMDP57764 484 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 CLDN10P78369 228 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 MRPS6P82932 125 aaKnown RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 ZNF200P98182 395 aaPredicted RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 TBX2Q13207 712 aaPredicted RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 PRPF4BQ13523 1007 aaKnown RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 TRIM14Q14142 442 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 MTFR1Q15390 333 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 SNRNP35Q16560 246 aaKnown RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 FIGNQ5HY92 759 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 FAM26DQ5JW98 314 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 FKBP15Q5T1M5 1219 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 ATF7IP2Q5U623 682 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 ZNF687Q8N1G0 1237 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 CELF4Q9BZC1 486 aaKnown RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 FAM49AQ9H0Q0 323 aaPredicted RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 STARD7Q9NQZ5 370 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 AGO2Q9UKV8 859 aaKnown RBP12.2□□□□□ -0.46
HMG20A-206ENST00000558845 SQORQ9Y6N5 450 aa12.2□□□□□ -0.46
HMG20A-206ENST00000558845 A0A1B0GUA9 196 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 ZNF233A6NK53 670 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 ARVCFO00192 962 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 OGTO15294 1046 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 TSPAN1O60635 241 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 N4BP1O75113 896 aaKnown RBP12.19□□□□□ -0.46
HMG20A-206ENST00000558845 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
HMG20A-206ENST00000558845 MCF2P10911 925 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 KRT13P13646 458 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 SFPQP23246 707 aaKnown RBP eCLIP12.19□□□□□ -0.46
HMG20A-206ENST00000558845 GTF2H1P32780 548 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 CDK7P50613 346 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 UBXN1Q04323 297 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 MGAT3Q09327 533 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 KCNH2Q12809 1159 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 NOLC1Q14978 699 aaKnown RBP eCLIP12.19□□□□□ -0.46
HMG20A-206ENST00000558845 PSMD6Q15008 389 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 SNX17Q15036 470 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 PTGISQ16647 500 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 KIZQ2M2Z5 673 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 TRIM71Q2Q1W2 868 aaKnown RBP12.19□□□□□ -0.46
HMG20A-206ENST00000558845 APBB1IPQ7Z5R6 666 aaPredicted RBP12.19□□□□□ -0.46
HMG20A-206ENST00000558845 ANKLE1Q8NAG6 615 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 CCDC51Q96ER9 411 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 DEFB118Q96PH6 123 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 NUP58Q9BVL2 599 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 HAPLN2Q9GZV7 340 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 RNF208Q9H0X6 261 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 SIK3Q9Y2K2 1263 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 DAAM1Q9Y4D1 1078 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.19□□□□□ -0.463e-8■□□□□ 9.7
HMG20A-206ENST00000558845 TRPV2Q9Y5S1 764 aa12.19□□□□□ -0.46
HMG20A-206ENST00000558845 TRIP12Q14669 1992 aaPredicted RBP12.18□□□□□ -0.46
HMG20A-206ENST00000558845 M0QZ92 97 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 STX10O60499 249 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 ERLIN2O94905 339 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 SGPL1O95470 568 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 ADRB2P07550 413 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 ARF4P18085 180 aaPredicted RBP12.18□□□□□ -0.46
HMG20A-206ENST00000558845 VAMP7P51809 220 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 LBX1P52954 281 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 CHMP4BP1P59074 171 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 CYP24A1Q07973 514 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 NCBP1Q09161 790 aaKnown RBP12.18□□□□□ -0.46
HMG20A-206ENST00000558845 FAM47CQ5HY64 1035 aa12.18□□□□□ -0.46
HMG20A-206ENST00000558845 C1orf53Q5VUE5 145 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms