RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 NOTUMQ6P988 496 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 DDX53Q86TM3 631 aaKnown RBP8.96□□□□□ -0.98
TRAF3-205ENST00000558700 RNF135Q8IUD6 432 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 TPH2Q8IWU9 490 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 HACE1Q8IYU2 909 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 TMEM87AQ8NBN3 555 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 CNNM3Q8NE01 707 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 ZNF592Q92610 1267 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 IGSF21Q96ID5 467 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 ZBP1Q9H171 429 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 TTC12Q9H892 705 aaPredicted RBP8.96□□□□□ -0.98
TRAF3-205ENST00000558700 XPNPEP1Q9NQW7 623 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 DZANK1Q9NVP4 752 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 KANSL3Q9P2N6 904 aa8.96□□□□□ -0.98
TRAF3-205ENST00000558700 POTEMA6NI47 508 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 MEIS3P2A8K0S8 358 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 NT5C1B-RDH14C9J2C7 533 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 INO80B-WBP1J3KQ70 363 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 TSPAN1O60635 241 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 USO1O60763 962 aaKnown RBP8.95□□□□□ -0.98
TRAF3-205ENST00000558700 CENPBP07199 599 aaPredicted RBP8.95□□□□□ -0.98
TRAF3-205ENST00000558700 MCM7P33993 719 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 TXKP42681 527 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 SLC11A1P49279 550 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 PTENP60484 403 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 ITIH3Q06033 890 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 POU5F1BQ06416 359 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 ST3GAL1Q11201 340 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 GNL2Q13823 731 aaKnown RBP8.95□□□□□ -0.98
TRAF3-205ENST00000558700 CAPSQ13938 189 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 KCNC3Q14003 757 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 CES5AQ6NT32 575 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 POTEHQ6S545 545 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 LYPD8Q6UX82 237 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 AGMOQ6ZNB7 445 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 TMEM173Q86WV6 379 aaPredicted RBP8.95□□□□□ -0.98
TRAF3-205ENST00000558700 CCDC83Q8IWF9 413 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 VPS52Q8N1B4 723 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 MRPL43Q8N983 215 aaKnown RBP8.95□□□□□ -0.98
TRAF3-205ENST00000558700 C8orf76Q96K31 380 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 RPGRIP1Q96KN7 1286 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 NECTIN4Q96NY8 510 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 FAM193BQ96PV7 902 aaPredicted RBP8.95□□□□□ -0.98
TRAF3-205ENST00000558700 LLPHQ9BRT6 129 aaKnown RBP8.95□□□□□ -0.98
TRAF3-205ENST00000558700 TMEM175Q9BSA9 504 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 GBP3Q9H0R5 595 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 POLR3FQ9H1D9 316 aaPredicted RBP8.95□□□□□ -0.98
TRAF3-205ENST00000558700 NRDE2Q9H7Z3 1164 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 MINDY3Q9H8M7 445 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 TUFT1Q9NNX1 390 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 UBN1Q9NPG3 1134 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 LIMCH1Q9UPQ0 1083 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 NR2E1Q9Y466 385 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 HCFC2Q9Y5Z7 792 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 IRAK3Q9Y616 596 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 ZMYM2Q9UBW7 1377 aa8.95□□□□□ -0.98
TRAF3-205ENST00000558700 KMT2EQ8IZD2 1858 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 WNT7AO00755 349 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 ZBTB39O15060 712 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 OFD1O75665 1012 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 SLITRK3O94933 977 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 URODP06132 367 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 GALTP07902 379 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 OR52Z1P0C646 297 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 CTSAP10619 480 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 ITGA4P13612 1032 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 NCLP19338 710 aaKnown RBP8.94□□□□□ -0.98
TRAF3-205ENST00000558700 MLH1P40692 756 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 RARRES1P49788 294 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 MBTD1Q05BQ5 628 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 UBXN11Q5T124 520 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 HAUS3Q68CZ6 603 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 SYCE2Q6PIF2 218 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 MRPL10Q7Z7H8 261 aaKnown RBP8.94□□□□□ -0.98
TRAF3-205ENST00000558700 PPFIBP1Q86W92 1011 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 MCPH1Q8NEM0 835 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 ERMNQ8TAM6 284 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 ASAP3Q8TDY4 903 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 BCL7CQ8WUZ0 217 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-205ENST00000558700 EDAQ92838 391 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 ZSCAN31Q96LW9 406 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-205ENST00000558700 MFSD14AQ96MC6 490 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 RIPOR3Q96MK2 946 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 MTMR9Q96QG7 549 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 HSD17B14Q9BPX1 270 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 APOL5Q9BWW9 433 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 NFKBIZQ9BYH8 718 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 TRIM6Q9C030 488 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-205ENST00000558700 CSRNP2Q9H175 543 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 S1PR5Q9H228 398 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 KCNH6Q9H252 994 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 SH2B1Q9NRF2 756 aaPredicted RBP8.94□□□□□ -0.98
TRAF3-205ENST00000558700 DNAJB4Q9UDY4 337 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 NOL7Q9UMY1 257 aaKnown RBP8.94□□□□□ -0.98
TRAF3-205ENST00000558700 IPPQ9Y573 584 aa8.94□□□□□ -0.98
TRAF3-205ENST00000558700 TECTAO75443 2155 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 ZNF318Q5VUA4 2279 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 MUC6Q6W4X9 2439 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 LRRIQ4A6NIV6 560 aa8.93□□□□□ -0.98
TRAF3-205ENST00000558700 INPPL1O15357 1258 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms