RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MRPS27Q92552 414 aaKnown RBP13.56□□□□□ -0.24
SMAD3-205ENST00000558428 TCHPQ9BT92 498 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 C11orf84Q9BUA3 381 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-205ENST00000558428 PLVAPQ9BX97 442 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 TRIM9Q9C026 710 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 MRPL44Q9H9J2 332 aaKnown RBP13.56□□□□□ -0.24
SMAD3-205ENST00000558428 TBC1D7Q9P0N9 293 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 HPSEQ9Y251 543 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 GIT1Q9Y2X7 761 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 PCDHB12Q9Y5F1 795 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 PRUNE2Q8WUY3 3088 aa13.56□□□□□ -0.24
SMAD3-205ENST00000558428 FRMD3A2A2Y4 597 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 GOLGA6L4A6NEF3 574 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 ARL5CA6NH57 179 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 ACTN4O43707 911 aaKnown RBP13.55□□□□□ -0.24
SMAD3-205ENST00000558428 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
SMAD3-205ENST00000558428 LPXNO60711 386 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 SLFN14P0C7P3 912 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 ABCD1P33897 745 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 MLH1P40692 756 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 AFMP43652 599 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 NDUFA8P51970 172 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 GTF2BQ00403 316 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 MPZL3Q6UWV2 235 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 ZNF720Q7Z2F6 126 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 ZBTB33Q86T24 672 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 KCNN1Q92952 543 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 GAD1Q99259 594 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 C7orf25Q9BPX7 421 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 GBP3Q9H0R5 595 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 CDT1Q9H211 546 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 GOLPH3LQ9H4A5 285 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 PTPRHQ9HD43 1115 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 TBC1D13Q9NVG8 400 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 SNTG2Q9NY99 539 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 KANSL3Q9P2N6 904 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 USP25Q9UHP3 1055 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 TBX20Q9UMR3 447 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 PLXNA4Q9HCM2 1894 aa13.55□□□□□ -0.24
SMAD3-205ENST00000558428 FAM237AA0A1B0GTK4 181 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 ZC3H11AO75152 810 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMAD3-205ENST00000558428 TOM1L1O75674 476 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 GCNT3O95395 438 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 POMCP01189 267 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 HARSP12081 509 aaKnown RBP13.54□□□□□ -0.24
SMAD3-205ENST00000558428 PROZP22891 400 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 CASP1P29466 404 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 MATR3P43243 847 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMAD3-205ENST00000558428 LIG4P49917 911 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 SCNN1GP51170 649 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 AFF1P51825 1210 aaKnown RBP13.54□□□□□ -0.24
SMAD3-205ENST00000558428 COASYQ13057 564 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 CSPP1Q1MSJ5 1256 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 ZC2HC1CQ53FD0 456 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-205ENST00000558428 CNNM4Q6P4Q7 775 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 KCNT2Q6UVM3 1135 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 ZPBP2Q6X784 338 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 MAP4K3Q8IVH8 894 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 THNSL1Q8IYQ7 743 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 GRAMD1CQ8IYS0 662 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 MICALL1Q8N3F8 863 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 KLHL23Q8NBE8 558 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 P2RX5Q93086 422 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 ZBTB45Q96K62 511 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-205ENST00000558428 ZFP42Q96MM3 310 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 ZNF558Q96NG5 402 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 FAM193BQ96PV7 902 aaPredicted RBP13.54□□□□□ -0.24
SMAD3-205ENST00000558428 RPS6KC1Q96S38 1066 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 BLZF1Q9H2G9 400 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 ST6GALNAC4Q9H4F1 302 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 NRDE2Q9H7Z3 1164 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 ALG13Q9NP73 1137 aaKnown RBP13.54□□□□□ -0.24
SMAD3-205ENST00000558428 TSHZ2Q9NRE2 1034 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 OLFML3Q9NRN5 406 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 KLK14Q9P0G3 267 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 GDAQ9Y2T3 454 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 MTCH2Q9Y6C9 303 aa13.54□□□□□ -0.24
SMAD3-205ENST00000558428 ATG2AQ2TAZ0 1938 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 ABLIM1O14639 778 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 HNRNPDLO14979 420 aaKnown RBP13.53□□□□□ -0.24
SMAD3-205ENST00000558428 GRM6O15303 877 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 CLDN3O15551 220 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 RECQL4O94761 1208 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 SLC34A2O95436 690 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 PIGRP01833 764 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 ITGB1P05556 798 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 MYBP10242 640 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 MCF2P10911 925 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 PBX3P40426 434 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 GRM5P41594 1212 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 CUL4BQ13620 913 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMAD3-205ENST00000558428 PTPROQ16827 1216 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 ZNF280BQ86YH2 543 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 CEP120Q8N960 986 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 MAFAQ8NHW3 353 aaPredicted RBP13.53□□□□□ -0.24
SMAD3-205ENST00000558428 HVCN1Q96D96 273 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 PAGE5Q96GU1 130 aa13.53□□□□□ -0.24
SMAD3-205ENST00000558428 CCDC94Q9BW85 323 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms