RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 KANSL3Q9P2N6 904 aa13.19□□□□□ -0.3
CDK12-203ENST00000558240 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 ABLIM1O14639 778 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 INPPL1O15357 1258 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 CLDN3O15551 220 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 GCNT3O95395 438 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 RB1P06400 928 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 LINC00271P0C7V0 271 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 MCF2P10911 925 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 CASP1P29466 404 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 GRIN2CQ14957 1233 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 ZNF568Q3ZCX4 644 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 ZC2HC1CQ53FD0 456 aaPredicted RBP13.18□□□□□ -0.3
CDK12-203ENST00000558240 NOMO2Q5JPE7 1267 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
CDK12-203ENST00000558240 STXBP4Q6ZWJ1 553 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 Q7L0L9 218 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 TMEM192Q8IY95 271 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 GRAMD1CQ8IYS0 662 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 LRRC43Q8N309 656 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 BICD1Q96G01 975 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 TCHPQ9BT92 498 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 PLVAPQ9BX97 442 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 NXF3Q9H4D5 531 aaKnown RBP13.18□□□□□ -0.3
CDK12-203ENST00000558240 TYW1Q9NV66 732 aaKnown RBP13.18□□□□□ -0.3
CDK12-203ENST00000558240 MTMR10Q9NXD2 777 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 EXOC7Q9UPT5 735 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 HES2Q9Y543 173 aa13.18□□□□□ -0.3
CDK12-203ENST00000558240 MRPL42Q9Y6G3 142 aaKnown RBP13.18□□□□□ -0.3
CDK12-203ENST00000558240 PDCD11Q14690 1871 aaKnown RBP13.18□□□□□ -0.3
CDK12-203ENST00000558240 MYO7AQ13402 2215 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.17□□□□□ -0.3
CDK12-203ENST00000558240 CARNS1A5YM72 827 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 C5orf67F2Z3F1 127 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
CDK12-203ENST00000558240 KLRC4O43908 158 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 GADD45BO75293 160 aaPredicted RBP13.17□□□□□ -0.3
CDK12-203ENST00000558240 AKAP5P24588 427 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 BMPR1AP36894 532 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 LIG4P49917 911 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 UBE2HP62256 183 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 MCL1Q07820 350 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDK12-203ENST00000558240 EPC2Q52LR7 807 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 FAM26FQ5R3K3 315 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 LRRC55Q6ZSA7 311 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 ELOA2Q8IYF1 753 aaPredicted RBP13.17□□□□□ -0.3
CDK12-203ENST00000558240 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 ARNTL2Q8WYA1 636 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 ZBTB45Q96K62 511 aaPredicted RBP13.17□□□□□ -0.3
CDK12-203ENST00000558240 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 ACCSQ96QU6 501 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 C17orf80Q9BSJ5 609 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 CDT1Q9H211 546 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 CWH43Q9H720 699 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 TMEM206Q9H813 350 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 CERS4Q9HA82 394 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 AAASQ9NRG9 546 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 SNTG2Q9NY99 539 aa13.17□□□□□ -0.3
CDK12-203ENST00000558240 PRRC2BQ5JSZ5 2229 aaKnown RBP13.16□□□□□ -0.3
CDK12-203ENST00000558240 ARL5CA6NH57 179 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 EIF3DO15371 548 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK12-203ENST00000558240 PRPF40AO75400 957 aaKnown RBP13.16□□□□□ -0.3
CDK12-203ENST00000558240 MYBP10242 640 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 LAG3P18627 525 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 GRM5P41594 1212 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 CASP5P51878 434 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 DPYDQ12882 1025 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 PSMD2Q13200 908 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 KYAT1Q16773 422 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 SPOUT1Q5T280 376 aaKnown RBP13.16□□□□□ -0.3
CDK12-203ENST00000558240 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 EPM2AIP1Q7L775 607 aaPredicted RBP13.16□□□□□ -0.3
CDK12-203ENST00000558240 SPRED2Q7Z698 418 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 ZBTB33Q86T24 672 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 ZNF507Q8TCN5 953 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 P2RX5Q93086 422 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 CCDC47Q96A33 483 aaKnown RBP13.16□□□□□ -0.3
CDK12-203ENST00000558240 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 GAD1Q99259 594 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 CDX2Q99626 313 aaPredicted RBP13.16□□□□□ -0.3
CDK12-203ENST00000558240 APOL6Q9BWW8 343 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 TBC1D13Q9NVG8 400 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 ANKFY1Q9P2R3 1169 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 PARP2Q9UGN5 583 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 INPP5FQ9Y2H2 1132 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 PCDHB12Q9Y5F1 795 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 STYXL1Q9Y6J8 313 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 COL6A3P12111 3177 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 ANK1P16157 1881 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 PLXNA4Q9HCM2 1894 aa13.16□□□□□ -0.3
CDK12-203ENST00000558240 REV3LO60673 3130 aa13.15□□□□□ -0.3
CDK12-203ENST00000558240 A0A0B4J269 797 aa13.15□□□□□ -0.3
CDK12-203ENST00000558240 H3BNC9 293 aa13.15□□□□□ -0.3
CDK12-203ENST00000558240 NR1I2O75469 434 aa13.15□□□□□ -0.3
CDK12-203ENST00000558240 RECQL4O94761 1208 aa13.15□□□□□ -0.3
CDK12-203ENST00000558240 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
CDK12-203ENST00000558240 RPN1P04843 607 aaKnown RBP13.15□□□□□ -0.3
CDK12-203ENST00000558240 CTNNB1P35222 781 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms