RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TSR2Q969E8 191 aaKnown RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 TOX2Q96NM4 488 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 GTPBP4Q9BZE4 634 aaKnown RBP2.23□□□□□ -2.05
HIF1A-212ENST00000557538 KMT5AQ9NQR1 393 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 DNM3Q9UQ16 869 aa2.23□□□□□ -2.05
HIF1A-212ENST00000557538 ISM1B1AKI9 464 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 MYL1P05976 194 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 RHCEP18577 417 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 GLRBP48167 497 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 TM4SF4P48230 202 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 FLT3LGP49771 235 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 RHDQ02161 417 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 SLFN13Q68D06 897 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 BORAQ6PGQ7 559 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 MIGA2Q7L4E1 593 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 RALYLQ86SE5 291 aaKnown RBP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 C14orf80Q86SX3 495 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 DENND1CQ8IV53 801 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 SP8Q8IXZ3 490 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 TTC9BQ8N6N2 239 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 OR2I1PQ8NGU4 316 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 KBTBD7Q8WVZ9 684 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 ERCC4Q92889 916 aaPredicted RBP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 FUBP1Q96AE4 644 aaKnown RBP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 PKNOX2Q96KN3 472 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 KCNC2Q96PR1 638 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 MAP3K14Q99558 947 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 SGPP1Q9BX95 441 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 MAN1C1Q9NR34 630 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 RCAN3Q9UKA8 241 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 RNF114Q9Y508 228 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 GOLIM4O00461 696 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 HMGCRP04035 888 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 LIMS1P48059 325 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 MRE11P49959 708 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 NCKAP1LP55160 1127 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 PPP2CBP62714 309 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 PPP2CAP67775 309 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 ANO6Q4KMQ2 910 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 TCERG1LQ5VWI1 586 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 ABHD15Q6UXT9 468 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 FAM90A1Q86YD7 464 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 KRTAP1-3Q8IUG1 177 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 LGI4Q8N135 537 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 MSL3Q8N5Y2 521 aaKnown RBP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 ZNF526Q8TF50 670 aaPredicted RBP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 SPATA25Q9BR10 227 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 LRFN3Q9BTN0 628 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 SLC52A1Q9NWF4 448 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 ZDHHC8Q9ULC8 765 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 CCDC154A6NI56 674 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 NT5C1B-RDH14C9J2C7 533 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 DDX3XO00571 662 aaKnown RBP eCLIP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 PRPF3O43395 683 aaKnown RBP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 SLC26A4O43511 780 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 B4GALT3O60512 393 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 EIF3JO75822 258 aaKnown RBP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 RAD17O75943 681 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 ALDH1A2O94788 518 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 THP07101 528 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 ALOX15P16050 662 aaPredicted RBP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 MEOX1P50221 254 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 ARFIP2P53365 341 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 NOGQ13253 232 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 SEMA5AQ13591 1074 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 BMT2Q1RMZ1 405 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 PGS1Q32NB8 556 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 DCAF17Q5H9S7 520 aaPredicted RBP2.22□□□□□ -2.05
HIF1A-212ENST00000557538 PDSS2Q86YH6 399 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 PLXDC1Q8IUK5 500 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 DNERQ8NFT8 737 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 MEGF9Q9H1U4 602 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 KCNH6Q9H252 994 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 FAM204AQ9H8W3 233 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 PCDHB1Q9Y5F3 818 aa2.22□□□□□ -2.05
HIF1A-212ENST00000557538 SLC43A1O75387 559 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 UBXN7O94888 489 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 PEX11BO96011 259 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 HNRNPLP14866 589 aaKnown RBP eCLIP2.21□□□□□ -2.062e-6■■□□□ 12.3
HIF1A-212ENST00000557538 ECHS1P30084 290 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 KIF23Q02241 960 aaPredicted RBP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 NOL8Q76FK4 1167 aaKnown RBP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 CATIPQ7Z7H3 387 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 TRMT2AQ8IZ69 625 aaKnown RBP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 SUCLG2Q96I99 432 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 STRBPQ96SI9 672 aaKnown RBP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 GPHA2Q96T91 129 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 GPR35Q9HC97 309 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 LANCL2Q9NS86 450 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 CROTQ9UKG9 612 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 ZBTB21Q9ULJ3 1066 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 USP18Q9UMW8 372 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 STXBP5LQ9Y2K9 1186 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 A6NNZ2 444 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 MYO1FO00160 1098 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 INHBBP09529 407 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 TCIRG1Q13488 830 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 HDAC1Q13547 482 aaPredicted RBP2.21□□□□□ -2.06
HIF1A-212ENST00000557538 DGKKQ5KSL6 1271 aa2.21□□□□□ -2.06
HIF1A-212ENST00000557538 CIAPIN1Q6FI81 312 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms