RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PAAF1Q9BRP4 392 aa15.69■□□□□ 0.1
SLIRP-210ENST00000557431 GPR62Q9BZJ7 368 aa15.69■□□□□ 0.1
SLIRP-210ENST00000557431 KANSL3Q9P2N6 904 aa15.69■□□□□ 0.1
SLIRP-210ENST00000557431 PDCD11Q14690 1871 aaKnown RBP15.68■□□□□ 0.1
SLIRP-210ENST00000557431 DKC1O60832 514 aaKnown RBP eCLIP15.68■□□□□ 0.1
SLIRP-210ENST00000557431 SLITRK3O94933 977 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 EFEMP2O95967 443 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 ADH1AP07327 375 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 ARF4P18085 180 aaPredicted RBP15.68■□□□□ 0.1
SLIRP-210ENST00000557431 FUT10Q6P4F1 479 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 NOTUMQ6P988 496 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 PRSS55Q6UWB4 352 aaPredicted RBP15.68■□□□□ 0.1
SLIRP-210ENST00000557431 C15orf39Q6ZRI6 1047 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 CCDC105Q8IYK2 499 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 ADSSL1Q8N142 457 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 DTWD2Q8NBA8 298 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 NKD2Q969F2 451 aaPredicted RBP15.68■□□□□ 0.1
SLIRP-210ENST00000557431 EIF2AK1Q9BQI3 630 aaKnown RBP15.68■□□□□ 0.1
SLIRP-210ENST00000557431 CSRNP2Q9H175 543 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 CXCL16Q9H2A7 254 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 WDR6Q9NNW5 1121 aaKnown RBP15.68■□□□□ 0.1
SLIRP-210ENST00000557431 GPRC5CQ9NQ84 441 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 TPCN1Q9ULQ1 816 aa15.68■□□□□ 0.1
SLIRP-210ENST00000557431 CARNS1A5YM72 827 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 LARGE1O95461 756 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 GCFC2P16383 781 aaKnown RBP15.67■□□□□ 0.1
SLIRP-210ENST00000557431 GLRA2P23416 452 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 DSG1Q02413 1049 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 SPECC1Q5M775 1068 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 OTUD6AQ7L8S5 288 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 GSTCDQ8NEC7 633 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 PIGOQ8TEQ8 1089 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 ZSWIM4Q9H7M6 989 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 PIDD1Q9HB75 910 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 RXFP1Q9HBX9 757 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 USP20Q9Y2K6 914 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 STK36Q9NRP7 1315 aa15.67■□□□□ 0.1
SLIRP-210ENST00000557431 ANK1P16157 1881 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 TTLL13PA6NNM8 815 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 ASAP2O43150 1006 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 TGM5O43548 720 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 USO1O60763 962 aaKnown RBP15.66■□□□□ 0.1
SLIRP-210ENST00000557431 NTHL1P78549 312 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 NECAB1Q8N987 351 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 CNNM3Q8NE01 707 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 CMASQ8NFW8 434 aaPredicted RBP15.66■□□□□ 0.1
SLIRP-210ENST00000557431 GPR152Q8TDT2 470 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 TM6SF1Q9BZW5 370 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 TRIM6Q9C030 488 aaPredicted RBP15.66■□□□□ 0.1
SLIRP-210ENST00000557431 POLR3FQ9H1D9 316 aaPredicted RBP15.66■□□□□ 0.1
SLIRP-210ENST00000557431 IGSF9Q9P2J2 1179 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 ORC3Q9UBD5 711 aaPredicted RBP15.66■□□□□ 0.1
SLIRP-210ENST00000557431 PARP2Q9UGN5 583 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 R4GN57 208 aa15.66■□□□□ 0.1
SLIRP-210ENST00000557431 EP300Q09472 2414 aaPredicted RBP15.65■□□□□ 0.1
SLIRP-210ENST00000557431 GVINP1Q7Z2Y8 2422 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 DCHS1Q96JQ0 3298 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 CASTOR2A6NHX0 329 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 POTEMA6NI47 508 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 TBX3O15119 743 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 GAS2O43903 313 aaKnown RBP15.65■□□□□ 0.1
SLIRP-210ENST00000557431 LRRN2O75325 713 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 DCNP07585 359 aaKnown RBP15.65■□□□□ 0.1
SLIRP-210ENST00000557431 FDPSP14324 419 aaKnown RBP15.65■□□□□ 0.1
SLIRP-210ENST00000557431 RFX1P22670 979 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 ARL2P36404 184 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 RTP2Q5QGT7 225 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 SLC44A3Q8N4M1 653 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 TNFRSF25Q93038 417 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 RTP3Q9BQQ7 232 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 RPP25Q9BUL9 199 aaKnown RBP15.65■□□□□ 0.1
SLIRP-210ENST00000557431 COLEC11Q9BWP8 271 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 NT5C3AQ9H0P0 336 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 TBC1D17Q9HA65 648 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 UBN1Q9NPG3 1134 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 CHST7Q9NS84 486 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 PPME1Q9Y570 386 aa15.65■□□□□ 0.1
SLIRP-210ENST00000557431 LRRIQ4A6NIV6 560 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 PFKFB2O60825 505 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 CDKL5O76039 1030 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 BAG4O95429 457 aaKnown RBP15.64■□□□□ 0.09
SLIRP-210ENST00000557431 EDN1P05305 212 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 AXLP30530 894 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 KRT2P35908 639 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 TXKP42681 527 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 TFDP1Q14186 410 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 MXD4Q14582 209 aaPredicted RBP15.64■□□□□ 0.09
SLIRP-210ENST00000557431 EXOC8Q8IYI6 725 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 SLFN12Q8IYM2 578 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 CCDC43Q96MW1 224 aaKnown RBP15.64■□□□□ 0.09
SLIRP-210ENST00000557431 ADAM28Q9UKQ2 775 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 SSX2IPQ9Y2D8 614 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 GIT1Q9Y2X7 761 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 TICRRQ7Z2Z1 1910 aa15.64■□□□□ 0.09
SLIRP-210ENST00000557431 XBP1P17861 261 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 LIG1P18858 919 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 IGFBP6P24592 240 aaPredicted RBP15.63■□□□□ 0.09
SLIRP-210ENST00000557431 RARRES1P49788 294 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 GRIK3Q13003 919 aa15.63■□□□□ 0.09
SLIRP-210ENST00000557431 CALCRLQ16602 461 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms