RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 VHLP40337 213 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 PDZK1Q5T2W1 519 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 ZNF654Q8IZM8 581 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 SPTLC3Q9NUV7 552 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 LRFN2Q9ULH4 789 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 NDUFAF6Q330K2 333 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 NSMFQ6X4W1 530 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 FAM227BQ96M60 508 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 NEK6Q9HC98 313 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 VTI1BQ9UEU0 232 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 ANAPC7Q9UJX3 599 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CHP2O43745 196 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 C4orf22Q6V702 233 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 FLAD1Q8NFF5 587 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 SLC7A5P2Q9GIP4 190 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CAAP1Q9H8G2 361 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CEP72Q9P209 647 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 IGHDP01880 384 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 RXRAP19793 462 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 FASTKD1Q53R41 847 aaKnown RBP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 FAM192AQ9GZU8 254 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 ZNF219Q9P2Y4 722 aaPredicted RBP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 KLHL41O60662 606 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 HMOX2P30519 316 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 HES6Q96HZ4 224 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 NSUN2Q08J23 767 aaKnown RBP eCLIP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 TNNI3KQ59H18 835 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 OSBPL6Q9BZF3 934 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 NRDE2Q9H7Z3 1164 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 SH3BP4Q9P0V3 963 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 PCDHA13Q9Y5I0 950 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 FPGT-TNNI3KV9GXZ4 949 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 DYRK3O43781 588 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 PDAP1Q13442 181 aaKnown RBP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 MB21D1Q8N884 522 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 ANKRD49Q8WVL7 239 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 hCG_2014768A0A024R1R8 64 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 AREL1O15033 823 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 PRPF4O43172 522 aaKnown RBP eCLIP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 ACADLP28330 430 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 MAGOHP61326 146 aaKnown RBP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 PADI6Q6TGC4 694 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 ZBED8Q8IZ13 594 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CLMNQ96JQ2 1002 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 SAYSD1Q9NPB0 183 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 KLHL3Q9UH77 587 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 RIMS2Q9UQ26 1411 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 POTEMA6NI47 508 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 PTPN12Q05209 780 aaKnown RBP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CCDC157Q569K6 752 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 TRIM65Q6PJ69 517 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 POTEHQ6S545 545 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 POTEGQ6S5H5 508 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 KIAA0408Q6ZU52 694 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 AATFQ9NY61 560 aaKnown RBP eCLIP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 WBP11Q9Y2W2 641 aaKnown RBP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 PCF11O94913 1555 aaKnown RBP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 TRPC5OSA6NMA1 111 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 TNFAIP2Q03169 654 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 EDRF1Q3B7T1 1238 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 NFRKBQ6P4R8 1299 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CYP4Z2PQ8N1L4 340 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 VPS33BQ9H267 617 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 SPACA6W5XKT8 324 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 HADHAP40939 763 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 USP14P54578 494 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 HDLBPQ00341 1268 aaKnown RBP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 NLRP14Q86W24 1093 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 OSCP1Q8WVF1 389 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CCDC17Q96LX7 622 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 USP44Q9H0E7 712 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 C6orf203Q9P0P8 240 aaPredicted RBP9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CDYLQ9Y232 598 aa9.3□□□□□ -0.92
SYNE3-205ENST00000557275 CCDC88CQ9P219 2028 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 NEMP1O14524 444 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 SLC25A24Q6NUK1 477 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 RDH13Q8NBN7 331 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 WDR36Q8NI36 951 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 GJA10Q969M2 543 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 ZNF496Q96IT1 587 aaPredicted RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 RANBP17Q9H2T7 1088 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 KMT5AQ9NQR1 393 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 ZBTB40Q9NUA8 1239 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 DTNAQ9Y4J8 743 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 YTHDC2Q9H6S0 1430 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 PEX5P50542 639 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 USP15Q9Y4E8 981 aaPredicted RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 CCDC166P0CW27 439 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 INO80BQ9C086 356 aaPredicted RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 HERC5Q9UII4 1024 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 CLCA2Q9UQC9 943 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 DUOX2Q9NRD8 1548 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 TSNQ15631 228 aaKnown RBP9.29□□□□□ -0.92
SYNE3-205ENST00000557275 CYP4Z1Q86W10 505 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 FAM162AQ96A26 154 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 DYRK4Q9NR20 520 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 TM9SF1O15321 606 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 RGS4P49798 205 aa9.29□□□□□ -0.92
SYNE3-205ENST00000557275 CDC73Q6P1J9 531 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms