RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 EVCP57679 992 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 RBM10P98175 930 aaKnown RBP9.74□□□□□ -0.85
VRK1-206ENST00000557222 PRKCEQ02156 737 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 VAC14Q08AM6 782 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 APOBRQ0VD83 1088 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 NTRK3Q16288 839 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 Q4G0T1 1027 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 XKR3Q5GH77 459 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 MOXD1Q6UVY6 613 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 Q6ZUG5 572 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 LYSMD3Q7Z3D4 306 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 CYP2U1Q7Z449 544 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 ZNF410Q86VK4 478 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 EXOC8Q8IYI6 725 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 ZDHHC14Q8IZN3 488 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 LRRC71Q8N4P6 559 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 GPR161Q8N6U8 529 aaKnown RBP9.74□□□□□ -0.85
VRK1-206ENST00000557222 ZSCAN1Q8NBB4 408 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 TMEM169Q96HH4 297 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 PPP1R16BQ96T49 567 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 JPH2Q9BR39 696 aaPredicted RBP9.74□□□□□ -0.85
VRK1-206ENST00000557222 TEKT3Q9BXF9 490 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 SORCS3Q9UPU3 1222 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 USTQ9Y2C2 406 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 PPME1Q9Y570 386 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 HCFC2Q9Y5Z7 792 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 WDR81Q562E7 1941 aa9.74□□□□□ -0.85
VRK1-206ENST00000557222 PROB1E7EW31 1015 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 EDIL3O43854 480 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 TRAK2O60296 914 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 CLASP2O75122 1294 aaKnown RBP9.73□□□□□ -0.85
VRK1-206ENST00000557222 PSMD10O75832 226 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 CXCL14O95715 111 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 SFPQP23246 707 aaKnown RBP eCLIP9.73□□□□□ -0.85
VRK1-206ENST00000557222 PSMA5P28066 241 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 PHKA2P46019 1235 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 RAB27AP51159 221 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 BCAR1P56945 870 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 MTMR3Q13615 1198 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 ATAT1Q5SQI0 421 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 LRCH2Q5VUJ6 765 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 GALNT17Q6IS24 598 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 LLGL2Q6P1M3 1020 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 BLOC1S2Q6QNY1 142 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 B3GNT9Q6UX72 402 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 CENPQQ7L2Z9 268 aaPredicted RBP9.73□□□□□ -0.85
VRK1-206ENST00000557222 DDX53Q86TM3 631 aaKnown RBP9.73□□□□□ -0.85
VRK1-206ENST00000557222 PPFIBP1Q86W92 1011 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 KREMEN2Q8NCW0 462 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 NANOS1Q8WY41 292 aaKnown RBP9.73□□□□□ -0.85
VRK1-206ENST00000557222 BRF1Q92994 677 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 CCDC136Q96JN2 1154 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 SCLT1Q96NL6 688 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 CEP89Q96ST8 783 aa9.73□□□□□ -0.85
VRK1-206ENST00000557222 NAP1L2Q9ULW6 460 aaPredicted RBP9.73□□□□□ -0.85
VRK1-206ENST00000557222 VPS13AQ96RL7 3174 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 ADAMTS3O15072 1205 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 EPB41L2O43491 1005 aaKnown RBP9.72□□□□□ -0.85
VRK1-206ENST00000557222 DKC1O60832 514 aaKnown RBP eCLIP9.72□□□□□ -0.85
VRK1-206ENST00000557222 MAFO75444 373 aaPredicted RBP9.72□□□□□ -0.85
VRK1-206ENST00000557222 CTSAP10619 480 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 RPS6KB1P23443 525 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 HSPA4P34932 840 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 GPC1P35052 558 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 KIAA1841Q6NSI8 718 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 GLB1LQ6UWU2 654 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 TRMT1LQ7Z2T5 733 aaKnown RBP9.72□□□□□ -0.85
VRK1-206ENST00000557222 PRICKLE2Q7Z3G6 844 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 MIER3Q7Z3K6 550 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 VPS52Q8N1B4 723 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 PHTF2Q8N3S3 785 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 TMEM87AQ8NBN3 555 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 HELQQ8TDG4 1101 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 PHKBQ93100 1093 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 PGBD4Q96DM1 585 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 IGSF21Q96ID5 467 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 JAKMIP1Q96N16 626 aaKnown RBP9.72□□□□□ -0.85
VRK1-206ENST00000557222 MBOAT7Q96N66 472 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 ZBP1Q9H171 429 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 UNC45AQ9H3U1 944 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 KMT2EQ8IZD2 1858 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 MYO15AQ9UKN7 3530 aa9.72□□□□□ -0.85
VRK1-206ENST00000557222 DMDP11532 3685 aa9.71□□□□□ -0.85
VRK1-206ENST00000557222 C2CD4DB7Z1M9 353 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 STBD1O95210 358 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 GALTP07902 379 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 PDIA3P30101 505 aaKnown RBP9.71□□□□□ -0.86
VRK1-206ENST00000557222 PBX3P40426 434 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 CLCN5P51795 746 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 VCPP55072 806 aaKnown RBP9.71□□□□□ -0.86
VRK1-206ENST00000557222 NLRP5P59047 1200 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 IRX6P78412 446 aaPredicted RBP9.71□□□□□ -0.86
VRK1-206ENST00000557222 UGCGQ16739 394 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 NOMO2Q5JPE7 1267 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 TWF2Q6IBS0 349 aaKnown RBP9.71□□□□□ -0.86
VRK1-206ENST00000557222 CYP26C1Q6V0L0 522 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 MRPL10Q7Z7H8 261 aaKnown RBP9.71□□□□□ -0.86
VRK1-206ENST00000557222 TRIM22Q8IYM9 498 aa9.71□□□□□ -0.86
VRK1-206ENST00000557222 TDRD5Q8NAT2 981 aaKnown RBP9.71□□□□□ -0.86
VRK1-206ENST00000557222 DAGLBQ8NCG7 672 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms