RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 CD4P01730 458 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 KRT13P13646 458 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 ENPEPQ07075 957 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 BFSP1Q12934 665 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 RSPH3Q86UC2 560 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 SERINC5Q86VE9 423 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 ERGIC2Q96RQ1 377 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 ANKFY1Q9P2R3 1169 aa25.86■■□□□ 1.73
SIX4-203ENST00000556952 AGO2Q9UKV8 859 aaKnown RBP25.86■■□□□ 1.73
SIX4-203ENST00000556952 DCDC2CA8MYV0 355 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 H0YGN5 161 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 CLDN3O15551 220 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 EXTL3O43909 919 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 AFPP02771 609 aaKnown RBP25.85■■□□□ 1.73
SIX4-203ENST00000556952 CLTBP09497 229 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 PROZP22891 400 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 GSDMDP57764 484 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 MCCD1P59942 119 aaPredicted RBP25.85■■□□□ 1.73
SIX4-203ENST00000556952 KCNH2Q12809 1159 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 AMHR2Q16671 573 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 DCAF17Q5H9S7 520 aaPredicted RBP25.85■■□□□ 1.73
SIX4-203ENST00000556952 ATF7IP2Q5U623 682 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 RPAINQ86UA6 219 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 SLC35C1Q96A29 364 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 SAAL1Q96ER3 474 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 MSTO1Q9BUK6 570 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 SEZ6LQ9BYH1 1024 aa25.85■■□□□ 1.73
SIX4-203ENST00000556952 PRDM5Q9NQX1 630 aaPredicted RBP25.85■■□□□ 1.73
SIX4-203ENST00000556952 IQCF3P0C7M6 154 aa25.84■■□□□ 1.73
SIX4-203ENST00000556952 MATR3P43243 847 aaKnown RBP eCLIP25.84■■□□□ 1.73
SIX4-203ENST00000556952 MCL1Q07820 350 aa25.84■■□□□ 1.73
SIX4-203ENST00000556952 TMEM62Q0P6H9 643 aa25.84■■□□□ 1.73
SIX4-203ENST00000556952 TCERG1LQ5VWI1 586 aa25.84■■□□□ 1.73
SIX4-203ENST00000556952 MPZL3Q6UWV2 235 aa25.84■■□□□ 1.73
SIX4-203ENST00000556952 RDH13Q8NBN7 331 aa25.84■■□□□ 1.73
SIX4-203ENST00000556952 TRIM44Q96DX7 344 aaPredicted RBP25.84■■□□□ 1.73
SIX4-203ENST00000556952 TNFSF13BQ9Y275 285 aa25.84■■□□□ 1.73
SIX4-203ENST00000556952 USP20Q9Y2K6 914 aa25.84■■□□□ 1.73
SIX4-203ENST00000556952 TRIM43BA6NCK2 446 aa25.83■■□□□ 1.73
SIX4-203ENST00000556952 TTLL13PA6NNM8 815 aa25.83■■□□□ 1.73
SIX4-203ENST00000556952 ERLIN2O94905 339 aa25.83■■□□□ 1.73
SIX4-203ENST00000556952 DARSP14868 501 aaKnown RBP25.83■■□□□ 1.73
SIX4-203ENST00000556952 TRIM14Q14142 442 aa25.83■■□□□ 1.73
SIX4-203ENST00000556952 HS1BP3Q53T59 392 aa25.83■■□□□ 1.73
SIX4-203ENST00000556952 USP37Q86T82 979 aa25.83■■□□□ 1.73
SIX4-203ENST00000556952 TRIM43Q96BQ3 446 aaPredicted RBP25.83■■□□□ 1.73
SIX4-203ENST00000556952 ZBTB45Q96K62 511 aaPredicted RBP25.83■■□□□ 1.73
SIX4-203ENST00000556952 HAPLN2Q9GZV7 340 aa25.83■■□□□ 1.73
SIX4-203ENST00000556952 PTPRHQ9HD43 1115 aa25.83■■□□□ 1.73
SIX4-203ENST00000556952 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.83■■□□□ 1.73
SIX4-203ENST00000556952 GOLGA8IPA6NC78 632 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 GOLGA8JA6NMD2 632 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 M0QZ92 97 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 B4GALT5O43286 388 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 CRYBB1P53674 252 aaPredicted RBP25.82■■□□□ 1.72
SIX4-203ENST00000556952 TBX2Q13207 712 aaPredicted RBP25.82■■□□□ 1.72
SIX4-203ENST00000556952 NOLC1Q14978 699 aaKnown RBP eCLIP25.82■■□□□ 1.72
SIX4-203ENST00000556952 PTGISQ16647 500 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 PTPN21Q16825 1174 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 TMEM132AQ24JP5 1023 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 CBWD2Q8IUF1 395 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 ZSWIM2Q8NEG5 633 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 OSMRQ99650 979 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 TBX21Q9UL17 535 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 ZNF233A6NK53 670 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 ABLIM1O14639 778 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 TLR3O15455 904 aaKnown RBP25.82■■□□□ 1.72
SIX4-203ENST00000556952 ADRB2P07550 413 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 EIF4BP23588 611 aaKnown RBP25.82■■□□□ 1.72
SIX4-203ENST00000556952 VAMP7P51809 220 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 MRPS6P82932 125 aaKnown RBP25.82■■□□□ 1.72
SIX4-203ENST00000556952 CCDC186Q7Z3E2 898 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 MFSD14AQ96MC6 490 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 FAM213AQ9BRX8 229 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 TCHPQ9BT92 498 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 TMEM39AQ9NV64 488 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 GINS2Q9Y248 185 aa25.82■■□□□ 1.72
SIX4-203ENST00000556952 TSPAN1O60635 241 aa25.81■■□□□ 1.72
SIX4-203ENST00000556952 SFPQP23246 707 aaKnown RBP eCLIP25.81■■□□□ 1.72
SIX4-203ENST00000556952 ITGB8P26012 769 aa25.81■■□□□ 1.72
SIX4-203ENST00000556952 PTK7Q13308 1070 aa25.81■■□□□ 1.72
SIX4-203ENST00000556952 SYCP1Q15431 976 aa25.81■■□□□ 1.72
SIX4-203ENST00000556952 ZNF568Q3ZCX4 644 aa25.81■■□□□ 1.72
SIX4-203ENST00000556952 TMC2Q8TDI7 906 aa25.81■■□□□ 1.72
SIX4-203ENST00000556952 IQCDQ96DY2 449 aa25.81■■□□□ 1.72
SIX4-203ENST00000556952 GTPBP10A4D1E9 387 aaKnown RBP25.8■■□□□ 1.72
SIX4-203ENST00000556952 OGTO15294 1046 aa25.8■■□□□ 1.72
SIX4-203ENST00000556952 CSDE1O75534 798 aaKnown RBP25.8■■□□□ 1.72
SIX4-203ENST00000556952 CYP24A1Q07973 514 aa25.8■■□□□ 1.72
SIX4-203ENST00000556952 NCBP1Q09161 790 aaKnown RBP25.8■■□□□ 1.72
SIX4-203ENST00000556952 CCDC150Q8NCX0 1101 aa25.8■■□□□ 1.72
SIX4-203ENST00000556952 NUP58Q9BVL2 599 aa25.8■■□□□ 1.72
SIX4-203ENST00000556952 CELF4Q9BZC1 486 aaKnown RBP25.8■■□□□ 1.72
SIX4-203ENST00000556952 TRPV2Q9Y5S1 764 aa25.8■■□□□ 1.72
SIX4-203ENST00000556952 KIAA0355O15063 1070 aa25.79■■□□□ 1.72
SIX4-203ENST00000556952 STX10O60499 249 aa25.79■■□□□ 1.72
SIX4-203ENST00000556952 TPM1P09493 284 aa25.79■■□□□ 1.72
SIX4-203ENST00000556952 ARF4P18085 180 aaPredicted RBP25.79■■□□□ 1.72
SIX4-203ENST00000556952 PDZD7Q9H5P4 517 aa25.79■■□□□ 1.72
SIX4-203ENST00000556952 CDHR5Q9HBB8 845 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms