RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 NOMO2Q5JPE7 1267 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 CLLU1OSQ5K130 101 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 LRRC55Q6ZSA7 311 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 FERMT3Q86UX7 667 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 SLC39A11Q8N1S5 342 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 MSLNLQ96KJ4 702 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 FAM193BQ96PV7 902 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 HSD17B14Q9BPX1 270 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 FOXP1Q9H334 677 aaPredicted RBP8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 EPHX3Q9H6B9 360 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 IFT122Q9HBG6 1241 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 TUFT1Q9NNX1 390 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 UBN1Q9NPG3 1134 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 AGPAT5Q9NUQ2 364 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 PCDHGC3Q9UN70 934 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 PCDHGC5Q9Y5F6 944 aa8.55□□□□□ -1.04
HNRNPC-226ENST00000556628 CNTNAP2Q9UHC6 1331 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 NT5C1B-RDH14C9J2C7 533 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 INO80B-WBP1J3KQ70 363 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 FSCN2O14926 492 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 ZBTB39O15060 712 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 GPR37L1O60883 481 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 EYA4O95677 639 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 ITGA4P13612 1032 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 ATF7P17544 494 aaPredicted RBP8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 PBX3P40426 434 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 RARRES1P49788 294 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 ZP2Q05996 745 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 POU5F1BQ06416 359 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 ST3GAL1Q11201 340 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 COASYQ13057 564 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 ZNF174Q15697 407 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 NOTUMQ6P988 496 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 HACE1Q8IYU2 909 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 FBXO18Q8NFZ0 1043 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 PIGOQ8TEQ8 1089 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 LPPQ93052 612 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 CCDC51Q96ER9 411 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 MTMR9Q96QG7 549 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 NACC1Q96RE7 527 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 TRIM6Q9C030 488 aaPredicted RBP8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 GBP3Q9H0R5 595 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 RSAD1Q9HA92 442 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 CD320Q9NPF0 282 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 KANSL3Q9P2N6 904 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 STK39Q9UEW8 545 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 BARX2Q9UMQ3 279 aaPredicted RBP8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 PCDHB2Q9Y5E7 798 aa8.54□□□□□ -1.04
HNRNPC-226ENST00000556628 ARHGEF35A5YM69 484 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 WNT7AO00755 349 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 DCXO43602 365 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 USO1O60763 962 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 LILRB3O75022 631 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 OFD1O75665 1012 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 CXCL14O95715 111 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 GLP2RO95838 553 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 OR52Z1P0C646 297 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 TECP42680 631 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 TRAPPC10P48553 1259 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 PTENP60484 403 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 GIT2Q14161 759 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 RABEP1Q15276 862 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 C8orf34Q49A92 452 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 TTC38Q5R3I4 469 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 HAUS3Q68CZ6 603 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 LLGL2Q6P1M3 1020 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 MRPL10Q7Z7H8 261 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 NOSTRINQ8IVI9 506 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 ZBTB8OSQ8IWT0 167 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 SMRP1Q8NCR6 262 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 MCPH1Q8NEM0 835 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 CASP10Q92851 521 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 LRFN3Q9BTN0 628 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 POLR3CQ9BUI4 534 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 PHF7Q9BWX1 381 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 RAB34Q9BZG1 259 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 POLR3FQ9H1D9 316 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 TMEM60Q9H2L4 133 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 NRDE2Q9H7Z3 1164 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 MINDY3Q9H8M7 445 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 XPNPEP1Q9NQW7 623 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 TBC1D13Q9NVG8 400 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 CLEC1BQ9P126 229 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 HCN4Q9Y3Q4 1203 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 USP15Q9Y4E8 981 aaPredicted RBP8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 A0A0C4DFX4 3053 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 SPTBN5Q9NRC6 3674 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 MYO7AQ13402 2215 aa8.53□□□□□ -1.04
HNRNPC-226ENST00000556628 TDRD15B5MCY1 1934 aaKnown RBP8.52□□□□□ -1.04
HNRNPC-226ENST00000556628 REV3LO60673 3130 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 BRWD1Q9NSI6 2320 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 FAM86C2PA6NEL3 165 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 LRRIQ4A6NIV6 560 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 HIDE1A8MVS5 230 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 PRR33A8MZF0 331 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 TSPAN1O60635 241 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 ALDH2P05091 517 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 GALTP07902 379 aa8.52□□□□□ -1.05
HNRNPC-226ENST00000556628 HOXB8P17481 243 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms