RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 RALYQ9UKM9 306 aaKnown RBP4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 PTCH2Q9Y6C5 1203 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 CHD6Q8TD26 2715 aa4.03□□□□□ -1.76
EFCAB11-210ENST00000556078 ASTN2O75129 1339 aaPredicted RBP4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 PCDH11XQ9BZA7 1347 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 PCDH11YQ9BZA8 1340 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 IL18BPO95998 194 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 ENO2P09104 434 aaPredicted RBP4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 SRGNP10124 158 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 NAT2P11245 290 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 FAHP16930 419 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 HOXC12P31275 282 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 LTBRP36941 435 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 GLRBP48167 497 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 TM4SF4P48230 202 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 GIPRP48546 466 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 ARID5AQ03989 594 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 PRR5LQ6MZQ0 368 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 KIAA1211LQ6NV74 962 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.02□□□□□ -1.774e-6■■□□□ 12.7
EFCAB11-210ENST00000556078 RPUSD2Q8IZ73 545 aaKnown RBP4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 ZNF654Q8IZM8 581 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 CLEC4DQ8WXI8 215 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 SCYL1Q96KG9 808 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 CLDND1Q9NY35 253 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 PLA2G3Q9NZ20 509 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 GIT1Q9Y2X7 761 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 NR2E1Q9Y466 385 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 PCDHGB7Q9Y5F8 929 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 PCDHA2Q9Y5H9 948 aa4.02□□□□□ -1.77
EFCAB11-210ENST00000556078 TRANK1O15050 2925 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 MAP3K19Q56UN5 1328 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 INO80B-WBP1J3KQ70 363 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 RHOBTB3O94955 611 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 PROZP22891 400 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 HOXC9P31274 260 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 MSX2P35548 267 aaPredicted RBP4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 GMPSP49915 693 aaPredicted RBP4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 PFKPQ01813 784 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 NHLH1Q02575 133 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 HHEXQ03014 270 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 ZNF394Q53GI3 561 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 CCDC93Q567U6 631 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 TBC1D9BQ66K14 1250 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 ADGRE4PQ86SQ3 457 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 METTL16Q86W50 562 aaKnown RBP4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 TDHQ8IZJ6 230 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 NTN5Q8WTR8 489 aaPredicted RBP4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 ANKS1AQ92625 1134 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 INO80BQ9C086 356 aaPredicted RBP4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 CDIP1Q9H305 208 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 TTYH1Q9H313 450 aaPredicted RBP4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 SLC6A20Q9NP91 592 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 TMOD3Q9NYL9 352 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 PTGFRNQ9P2B2 879 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 ZMYND8Q9ULU4 1186 aaPredicted RBP4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 SCAF8Q9UPN6 1271 aaKnown RBP4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 SCN9AQ15858 1988 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 ASPMQ8IZT6 3477 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 MGAMO43451 1857 aa4.01□□□□□ -1.77
EFCAB11-210ENST00000556078 WDR87Q6ZQQ6 2873 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 LTBP2Q14767 1821 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 SOS1Q07889 1333 aaPredicted RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 EPG5Q9HCE0 2579 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 ANKRD62A6NC57 917 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 ZNF839A8K0R7 811 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 ARHGAP6O43182 974 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 STK10O94804 968 aaKnown RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 HMGB2P26583 209 aaKnown RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 ETV4P43268 484 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 EIF6P56537 245 aaKnown RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 C21orf58P58505 322 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 GRIN1Q05586 938 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 PAN2Q504Q3 1202 aaKnown RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 COLEC12Q5KU26 742 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 CD276Q5ZPR3 534 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 CCDC81Q6ZN84 652 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 C2orf69Q8N8R5 385 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 MICAL1Q8TDZ2 1067 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 CFHR4Q92496 578 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 CHAMP1Q96JM3 812 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 CCDC140Q96MF4 163 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 UHRF1Q96T88 793 aaPredicted RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 BUD13Q9BRD0 619 aaKnown RBP eCLIP4□□□□□ -1.77
EFCAB11-210ENST00000556078 BRIP1Q9BX63 1249 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 C12orf65Q9H3J6 166 aaKnown RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 NELFAQ9H3P2 528 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 ZSWIM4Q9H7M6 989 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 PUF60Q9UHX1 559 aaKnown RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 TMA7Q9Y2S6 64 aaKnown RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 DDX60LQ5H9U9 1706 aaKnown RBP4□□□□□ -1.77
EFCAB11-210ENST00000556078 SBNO2Q9Y2G9 1366 aa4□□□□□ -1.77
EFCAB11-210ENST00000556078 MYO9BQ13459 2157 aa3.99□□□□□ -1.77
EFCAB11-210ENST00000556078 PLXNA3P51805 1871 aa3.99□□□□□ -1.77
EFCAB11-210ENST00000556078 ZNF318Q5VUA4 2279 aa3.99□□□□□ -1.77
EFCAB11-210ENST00000556078 MASP2O00187 686 aa3.99□□□□□ -1.77
EFCAB11-210ENST00000556078 NUDT3O95989 172 aa3.99□□□□□ -1.77
EFCAB11-210ENST00000556078 CPP00450 1065 aa3.99□□□□□ -1.77
EFCAB11-210ENST00000556078 LMNAP02545 664 aaKnown RBP3.99□□□□□ -1.77
EFCAB11-210ENST00000556078 LCP1P13796 627 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms