RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 CRYGNQ8WXF5 182 aa8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 SPATA32Q96LK8 384 aa8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 FGD4Q96M96 766 aa8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 FAM20AQ96MK3 541 aa8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 SDF4Q9BRK5 362 aa8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 VTA1Q9NP79 307 aa8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 KCNH7Q9NS40 1196 aa8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 ZHX1Q9UKY1 873 aaPredicted RBP8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 MRVI1Q9Y6F6 885 aa8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 DDX49Q9Y6V7 483 aaKnown RBP8.56□□□□□ -1.04
SUPT16H-204ENST00000555943 ASTN1O14525 1302 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 ZNFX1Q9P2E3 1918 aaKnown RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 GOLGA6L4A6NEF3 574 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 IPO5O00410 1097 aaKnown RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 SPTLC2O15270 562 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 MSH4O15457 936 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 SLC37A4O43826 429 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 GAS7O60861 476 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 SNAI1O95863 264 aaPredicted RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 DLGAP3O95886 979 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 TXNP10599 105 aaKnown RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 TGFB3P10600 412 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 COL6A1P12109 1028 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 ITGB5P18084 799 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 GARTP22102 1010 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 MARCKSP29966 332 aaPredicted RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 CNGA1P29973 690 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 CYP2C19P33261 490 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 EIF4A3P38919 411 aaKnown RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 ME1P48163 572 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 NASPP49321 788 aaPredicted RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 ATP2C1P98194 919 aaPredicted RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 ACVR2BQ13705 512 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 NEDD9Q14511 834 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 SLC39A14Q15043 492 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 PRRT3Q5FWE3 981 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 LRCH2Q5VUJ6 765 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 ARL6IP4Q66PJ3 421 aaKnown RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 FBXO16Q8IX29 292 aaPredicted RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 LINC00301Q8NCQ3 95 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 GIMAP8Q8ND71 665 aaPredicted RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 KCNG4Q8TDN1 519 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 MBOAT7Q96N66 472 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 INPP4AQ96PE3 977 aaPredicted RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 UIMC1Q96RL1 719 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 GDF15Q99988 308 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 TEKT3Q9BXF9 490 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 RAB34Q9BZG1 259 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 FTOQ9C0B1 505 aaKnown RBP eCLIP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 CCDC86Q9H6F5 360 aaKnown RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 TBC1D22BQ9NU19 505 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 FLRT1Q9NZU1 646 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 DDX20Q9UHI6 824 aaKnown RBP8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 NRBP1Q9UHY1 535 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 PCDHA12Q9UN75 941 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 DNAH12Q6ZR08 3092 aa8.55□□□□□ -1.04
SUPT16H-204ENST00000555943 IGLV3-22A0A075B6J6 115 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 DNM1LO00429 736 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 EDIL3O43854 480 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 PPP6R2O75170 966 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 WISP1O95388 367 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 ARP10275 920 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 COL8A1P27658 744 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 CCND3P30281 292 aaPredicted RBP8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 ICAM3P32942 547 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 PRPHP41219 470 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 SEPT6Q14141 434 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 PRAMEF19Q5SWL8 479 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 IQSEC1Q6DN90 963 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 FBXL19Q6PCT2 694 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 C7orf61Q8IZ16 206 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 ARRDC4Q8NCT1 418 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 LEO1Q8WVC0 666 aaPredicted RBP8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 GAL3ST3Q96A11 431 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 FERMT2Q96AC1 680 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 SCARF2Q96GP6 870 aaPredicted RBP8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 RIT2Q99578 217 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 TMEM60Q9H2L4 133 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 TTC12Q9H892 705 aaPredicted RBP8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 MLXIPQ9HAP2 919 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 AGO4Q9HCK5 861 aaKnown RBP8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 PDGFCQ9NRA1 345 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 FAM184BQ9ULE4 1060 aa8.54□□□□□ -1.04
SUPT16H-204ENST00000555943 SMCHD1A6NHR9 2005 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 VWA3AA6NCI4 1184 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 DDX39AO00148 427 aaKnown RBP8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 NOP56O00567 594 aaKnown RBP8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 NKRFO15226 690 aaKnown RBP eCLIP8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 SEPT4O43236 478 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 CYBAP13498 195 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 AKR1A1P14550 325 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 ADCYAP1R1P41586 468 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 TECP42680 631 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 TNFAIP2Q03169 654 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 PTPAQ15257 358 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 GRIK4Q16099 956 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 LY6KQ17RY6 165 aa8.53□□□□□ -1.04
SUPT16H-204ENST00000555943 DUOXA2Q1HG44 320 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms