RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 GATMP50440 423 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 PLCB3Q01970 1234 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 SPOUT1Q5T280 376 aaKnown RBP10.24□□□□□ -0.77
CHD8-206ENST00000553870 SLFN12LQ6IEE8 588 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 KANK3Q6NY19 840 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 MPZL3Q6UWV2 235 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 LRRC55Q6ZSA7 311 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 MYLIPQ8WY64 445 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 MRPS27Q92552 414 aaKnown RBP10.24□□□□□ -0.77
CHD8-206ENST00000553870 LPPQ93052 612 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 ZNF558Q96NG5 402 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 TMEM175Q9BSA9 504 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 TARS2Q9BW92 718 aaKnown RBP10.24□□□□□ -0.77
CHD8-206ENST00000553870 STRA6Q9BX79 667 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 MRPL44Q9H9J2 332 aaKnown RBP10.24□□□□□ -0.77
CHD8-206ENST00000553870 CERS4Q9HA82 394 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 TBC1D13Q9NVG8 400 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 PUF60Q9UHX1 559 aaKnown RBP10.24□□□□□ -0.77
CHD8-206ENST00000553870 MTUS1Q9ULD2 1270 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 PLAGL2Q9UPG8 496 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 EXOC7Q9UPT5 735 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 LZTS1Q9Y250 596 aa10.24□□□□□ -0.77
CHD8-206ENST00000553870 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.24□□□□□ -0.77
CHD8-206ENST00000553870 ARL5CA6NH57 179 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 EPOPA6NHQ4 379 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 ABLIM1O14639 778 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 NR1I2O75469 434 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 PPP1R37O75864 691 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 IDEP14735 1019 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 GRM5P41594 1212 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 LIG4P49917 911 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 YARSP54577 528 aaKnown RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 POU5F1Q01860 360 aaKnown RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 KRT17Q04695 432 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 RNASELQ05823 741 aaKnown RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 MCL1Q07820 350 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 ADGRE1Q14246 886 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 POSTNQ15063 836 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 LONRF3Q496Y0 759 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 EEF1DP3Q658K8 133 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 PDE12Q6L8Q7 609 aaKnown RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 KCNT2Q6UVM3 1135 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 UNC13DQ70J99 1090 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 CDR2LQ86X02 465 aaPredicted RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 SFR1Q86XK3 245 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 MAP4K3Q8IVH8 894 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 FSIP1Q8NA03 581 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 KLHL23Q8NBE8 558 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 COLGALT1Q8NBJ5 622 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 MRPL38Q96DV4 380 aaKnown RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 PAGE5Q96GU1 130 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 CHAMP1Q96JM3 812 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 FAM193BQ96PV7 902 aaPredicted RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 TSPAN18Q96SJ8 248 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 GAD1Q99259 594 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 CCDC94Q9BW85 323 aaPredicted RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 NXF3Q9H4D5 531 aaKnown RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 TOPORSQ9NS56 1045 aaPredicted RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 SPG21Q9NZD8 308 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 PARP2Q9UGN5 583 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 SERTAD1Q9UHV2 236 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 HES2Q9Y543 173 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 MTCH2Q9Y6C9 303 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 SZT2Q5T011 3432 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 LAMA2P24043 3122 aaKnown RBP10.23□□□□□ -0.77
CHD8-206ENST00000553870 MYH11P35749 1972 aa10.23□□□□□ -0.77
CHD8-206ENST00000553870 FNDC1Q4ZHG4 1894 aaPredicted RBP10.22□□□□□ -0.77
CHD8-206ENST00000553870 MEIS3P2A8K0S8 358 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 RFXAPO00287 272 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 HNRNPDLO14979 420 aaKnown RBP10.22□□□□□ -0.77
CHD8-206ENST00000553870 ZNF202O95125 648 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 EDN1P05305 212 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 IGFBP4P22692 258 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 NMT1P30419 496 aaKnown RBP10.22□□□□□ -0.77
CHD8-206ENST00000553870 NDUFA8P51970 172 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 BCAR1P56945 870 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 SNRPFP62306 86 aaKnown RBP10.22□□□□□ -0.77
CHD8-206ENST00000553870 ASIC1P78348 528 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 GRIK3Q13003 919 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 COASYQ13057 564 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 PSMD2Q13200 908 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 BMS1Q14692 1282 aaKnown RBP10.22□□□□□ -0.77
CHD8-206ENST00000553870 ZNF568Q3ZCX4 644 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 XKR4Q5GH76 650 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 SPRED2Q7Z698 418 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 PIP4P2Q8N4L2 257 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 GSTCDQ8NEC7 633 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 SPPL3Q8TCT6 385 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 STAMQ92783 540 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 BICD1Q96G01 975 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 ACAP3Q96P50 834 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 IPO9Q96P70 1041 aaKnown RBP10.22□□□□□ -0.77
CHD8-206ENST00000553870 ACCSQ96QU6 501 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 RPS6KC1Q96S38 1066 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 CDT1Q9H211 546 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 NRDE2Q9H7Z3 1164 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 TMEM206Q9H813 350 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 PLEKHA5Q9HAU0 1116 aa10.22□□□□□ -0.77
CHD8-206ENST00000553870 GDPD2Q9HCC8 539 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms