RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SETXQ7Z333 2677 aaKnown RBP10.19□□□□□ -0.78
PRKCH-208ENST00000553846 ARL5CA6NH57 179 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 LRP3O75074 770 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 HOXA9P31269 272 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 MTAPQ13126 283 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 UBXN2BQ14CS0 331 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 PFKFB3Q16875 520 aaPredicted RBP10.19□□□□□ -0.78
PRKCH-208ENST00000553846 XKR3Q5GH77 459 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 ANO5Q75V66 913 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 CATSPER4Q7RTX7 472 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 GRASPQ7Z6J2 395 aaPredicted RBP10.19□□□□□ -0.78
PRKCH-208ENST00000553846 PALB2Q86YC2 1186 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 ITFG1Q8TB96 612 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 GJA10Q969M2 543 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 ZFP42Q96MM3 310 aa10.19□□□□□ -0.78
PRKCH-208ENST00000553846 FAM126AQ9BYI3 521 aaPredicted RBP10.19□□□□□ -0.78
PRKCH-208ENST00000553846 RBM28Q9NW13 759 aaKnown RBP10.19□□□□□ -0.78
PRKCH-208ENST00000553846 SUCLA2Q9P2R7 463 aaPredicted RBP10.19□□□□□ -0.78
PRKCH-208ENST00000553846 GREB1Q4ZG55 1949 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 TM4SF5O14894 197 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 GAS2O43903 313 aaKnown RBP10.18□□□□□ -0.78
PRKCH-208ENST00000553846 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 HOXB3P14651 431 aaPredicted RBP10.18□□□□□ -0.78
PRKCH-208ENST00000553846 RPL17P18621 184 aaKnown RBP10.18□□□□□ -0.78
PRKCH-208ENST00000553846 SFNP31947 248 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 JAK3P52333 1124 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 NECTIN1Q15223 517 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 RTN1Q16799 776 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 MTERF2Q49AM1 385 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 RTP2Q5QGT7 225 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 ZBTB41Q5SVQ8 909 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 DIEXFQ68CQ4 756 aaKnown RBP10.18□□□□□ -0.78
PRKCH-208ENST00000553846 FUT10Q6P4F1 479 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 ELMSAN1Q6PJG2 1045 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 MTSS1LQ765P7 747 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 RHPN2Q8IUC4 686 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 NPAS3Q8IXF0 933 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 REXO1Q8N1G1 1221 aaKnown RBP10.18□□□□□ -0.78
PRKCH-208ENST00000553846 RDM1Q8NG50 284 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 PHKBQ93100 1093 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 NLRP4Q96MN2 994 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 KXD1Q9BQD3 176 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 EIF2AQ9BY44 585 aaKnown RBP10.18□□□□□ -0.78
PRKCH-208ENST00000553846 INO80BQ9C086 356 aaPredicted RBP10.18□□□□□ -0.78
PRKCH-208ENST00000553846 CHRDQ9H2X0 955 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.18□□□□□ -0.78
PRKCH-208ENST00000553846 SEPT9Q9UHD8 586 aaPredicted RBP10.18□□□□□ -0.78
PRKCH-208ENST00000553846 USP18Q9UMW8 372 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 IPPQ9Y573 584 aa10.18□□□□□ -0.78
PRKCH-208ENST00000553846 ZMYM2Q9UBW7 1377 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 NRG2O14511 850 aaPredicted RBP10.17□□□□□ -0.78
PRKCH-208ENST00000553846 ADAM12O43184 909 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 HNRNPA1P09651 372 aaKnown RBP eCLIP10.17□□□□□ -0.78
PRKCH-208ENST00000553846 FCARP24071 287 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 MLH1P40692 756 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 OR1G1P47890 313 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 SCNN1GP51170 649 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 RCAN1P53805 252 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 EXOSC10Q01780 885 aaKnown RBP10.17□□□□□ -0.78
PRKCH-208ENST00000553846 SPEM2Q0P670 501 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 COL9A2Q14055 689 aaPredicted RBP10.17□□□□□ -0.78
PRKCH-208ENST00000553846 AMHR2Q16671 573 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 CREB3L3Q68CJ9 461 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 LAIR1Q6GTX8 287 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 TPRG1Q6ZUI0 275 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
PRKCH-208ENST00000553846 ETNPPLQ8TBG4 499 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 SECISBP2LQ93073 1101 aaKnown RBP10.17□□□□□ -0.78
PRKCH-208ENST00000553846 GAD1Q99259 594 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 CLSTN3Q9BQT9 956 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 PLA2G2FQ9BZM2 168 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 DHX33Q9H6R0 707 aaKnown RBP10.17□□□□□ -0.78
PRKCH-208ENST00000553846 PIDD1Q9HB75 910 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 WRAP73Q9P2S5 460 aaPredicted RBP10.17□□□□□ -0.78
PRKCH-208ENST00000553846 SAMM50Q9Y512 469 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 COL4A3BPQ9Y5P4 624 aa10.17□□□□□ -0.78
PRKCH-208ENST00000553846 RALGAPA1Q6GYQ0 2036 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 GCN1Q92616 2671 aaKnown RBP10.16□□□□□ -0.78
PRKCH-208ENST00000553846 TICRRQ7Z2Z1 1910 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 ZBTB43O43298 467 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 CHMP2AO43633 222 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 GDF9O60383 454 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 TSPAN1O60635 241 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 GAS7O60861 476 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 ECI2O75521 394 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 RETP07949 1114 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 PFKPQ01813 784 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 GAS6Q14393 721 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 CSRP2Q16527 193 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 SLC5A9Q2M3M2 681 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 USP41Q3LFD5 358 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 LRCH2Q5VUJ6 765 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 PLA2G4FQ68DD2 849 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 PRSS55Q6UWB4 352 aaPredicted RBP10.16□□□□□ -0.78
PRKCH-208ENST00000553846 PRR23CQ6ZRP0 262 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 SRGAP1Q7Z6B7 1085 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 PIK3R5Q8WYR1 880 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 PAAF1Q9BRP4 392 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 UBN1Q9NPG3 1134 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 SEMA4GQ9NTN9 838 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms