RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 LCP1P13796 627 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 CNGA1P29973 690 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 MAPK4P31152 587 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 HIBADHP31937 336 aaKnown RBP7.34□□□□□ -1.23
ATXN3-223ENST00000553686 SLC9A5Q14940 896 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 TESK1Q15569 626 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 RAB30Q15771 203 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 FBLN7Q53RD9 439 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 SLC35F1Q5T1Q4 408 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 TCERG1LQ5VWI1 586 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 FAM129CQ86XR2 697 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 TMEM151BQ8IW70 566 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 DACT3Q96B18 629 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-223ENST00000553686 TRIM43Q96BQ3 446 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-223ENST00000553686 TSPAN17Q96FV3 270 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 TRMT2BQ96GJ1 504 aaKnown RBP7.34□□□□□ -1.23
ATXN3-223ENST00000553686 C1orf159Q96HA4 380 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 CHAMP1Q96JM3 812 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 CHMP4AQ9BY43 222 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 SLC28A3Q9HAS3 691 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 DDX20Q9UHI6 824 aaKnown RBP7.34□□□□□ -1.23
ATXN3-223ENST00000553686 PCDHA2Q9Y5H9 948 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 COL4A1P02462 1669 aa7.34□□□□□ -1.23
ATXN3-223ENST00000553686 LAMB1P07942 1786 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 ANKRD18BA2A2Z9 1011 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 TRIM75PA6NK02 468 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 CHL1O00533 1208 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 PRODHO43272 600 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 DLX3O60479 287 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 FRAT2O75474 233 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-223ENST00000553686 ASGR2P07307 311 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 ATF2P15336 505 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 IGFBP6P24592 240 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-223ENST00000553686 RIPK4P57078 832 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 RBL2Q08999 1139 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 NEXNQ0ZGT2 675 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 MAP4K2Q12851 820 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 TRIM60Q495X7 471 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 APOBEC3HQ6NTF7 200 aaKnown RBP7.33□□□□□ -1.24
ATXN3-223ENST00000553686 GPRC5AQ8NFJ5 357 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 PWWP2AQ96N64 755 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 PLEKHF1Q96S99 279 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 AARSD1Q9BTE6 412 aaKnown RBP7.33□□□□□ -1.24
ATXN3-223ENST00000553686 MORF4L1Q9UBU8 362 aa7.33□□□□□ -1.24
ATXN3-223ENST00000553686 LRRFIP2Q9Y608 721 aaKnown RBP7.33□□□□□ -1.24
ATXN3-223ENST00000553686 MAST3O60307 1309 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 PDPK1O15530 556 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 CTNND1O60716 968 aaKnown RBP7.32□□□□□ -1.24
ATXN3-223ENST00000553686 GLRX3O76003 335 aaKnown RBP7.32□□□□□ -1.24
ATXN3-223ENST00000553686 CSF1RP07333 972 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 CLTBP09497 229 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 FPR2P25090 351 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 LIMS1P48059 325 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 AFF3P51826 1226 aaKnown RBP7.32□□□□□ -1.24
ATXN3-223ENST00000553686 EPHB4P54760 987 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 FOXO4P98177 505 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 TLE2Q04725 743 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 LSAMPQ13449 338 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 HHIPL2Q6UWX4 724 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 LRRC47Q8N1G4 583 aaKnown RBP7.32□□□□□ -1.24
ATXN3-223ENST00000553686 EDC3Q96F86 508 aaKnown RBP7.32□□□□□ -1.24
ATXN3-223ENST00000553686 TMEM169Q96HH4 297 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 RNF38Q9H0F5 515 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 CCDC113Q9H0I3 377 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 ARHGEF4Q9NR80 690 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 SIRPGQ9P1W8 387 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 MSRB2Q9Y3D2 182 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 CDH23Q9H251 3354 aa7.32□□□□□ -1.24
ATXN3-223ENST00000553686 ZSWIM8A7E2V4 1837 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 LAMB2P55268 1798 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 KIAA0355O15063 1070 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 SGSM2O43147 1006 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 PLIN1O60240 522 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 PMLP29590 882 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 IRX3P78415 501 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-223ENST00000553686 TCP10Q12799 353 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 IFIT5Q13325 482 aaKnown RBP7.31□□□□□ -1.24
ATXN3-223ENST00000553686 UBE4AQ14139 1066 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 KRT24Q2M2I5 525 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 TREML2Q5T2D2 321 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 GJC2Q5T442 439 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-223ENST00000553686 MROH9Q5TGP6 573 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 NSMFQ6X4W1 530 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 USP53Q70EK8 1073 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 SPATC1Q76KD6 591 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 DCP2Q8IU60 420 aaKnown RBP7.31□□□□□ -1.24
ATXN3-223ENST00000553686 USP6NLQ92738 828 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 ZNF669Q96BR6 464 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-223ENST00000553686 PLA2G12BQ9BX93 195 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 AP5M1Q9H0R1 490 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 MTIF3Q9H2K0 278 aaKnown RBP7.31□□□□□ -1.24
ATXN3-223ENST00000553686 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.31□□□□□ -1.24
ATXN3-223ENST00000553686 FAN1Q9Y2M0 1017 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 LAS1LQ9Y4W2 734 aaKnown RBP7.31□□□□□ -1.24
ATXN3-223ENST00000553686 NPFFR2Q9Y5X5 522 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 X6R8D5 127 aa7.31□□□□□ -1.24
ATXN3-223ENST00000553686 UTYO14607 1347 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 FGFR1P11362 822 aa7.3□□□□□ -1.24
ATXN3-223ENST00000553686 PABPC1P11940 636 aaKnown RBP7.3□□□□□ -1.24
ATXN3-223ENST00000553686 PPP2R1AP30153 589 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms