RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 INPP5FQ9Y2H2 1132 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 YBX2Q9Y2T7 364 aaKnown RBP15.16■□□□□ 0.02
TUBB3-202ENST00000553656 HES2Q9Y543 173 aa15.16■□□□□ 0.02
TUBB3-202ENST00000553656 KLRC4O43908 158 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 PRPF6O94906 941 aaKnown RBP15.15■□□□□ 0.02
TUBB3-202ENST00000553656 EHHADHQ08426 723 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 KCNB1Q14721 858 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 SPOUT1Q5T280 376 aaKnown RBP15.15■□□□□ 0.02
TUBB3-202ENST00000553656 SLFN12LQ6IEE8 588 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 CRIPAKQ8N1N5 446 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 LRRC43Q8N309 656 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 SMG8Q8ND04 991 aaKnown RBP15.15■□□□□ 0.02
TUBB3-202ENST00000553656 HELQQ8TDG4 1101 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 CDT1Q9H211 546 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 LMBRD1Q9NUN5 540 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 GIT1Q9Y2X7 761 aa15.15■□□□□ 0.02
TUBB3-202ENST00000553656 TMEM265A0A087WTH1 108 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 LCHNA4D1U4 455 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 SOX1O00570 391 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-202ENST00000553656 RHOBTB3O94955 611 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 KIF20AO95235 890 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 PROZP22891 400 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 GATMP50440 423 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 YARSP54577 528 aaKnown RBP15.14■□□□□ 0.01
TUBB3-202ENST00000553656 KYAT1Q16773 422 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 NOMO2Q5JPE7 1267 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 CLLU1OSQ5K130 101 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 ZNF697Q5TEC3 545 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-202ENST00000553656 POMGNT1Q8WZA1 660 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 ZNF689Q96CS4 500 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-202ENST00000553656 LRCH3Q96II8 777 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 GSDMAQ96QA5 445 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 RPS6KC1Q96S38 1066 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 MSTO1Q9BUK6 570 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 STRA6Q9BX79 667 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 FGFBP2Q9BYJ0 223 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 PTPRHQ9HD43 1115 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 TOPORSQ9NS56 1045 aaPredicted RBP15.14■□□□□ 0.01
TUBB3-202ENST00000553656 SNTG2Q9NY99 539 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 GDAQ9Y2T3 454 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 GBF1Q92538 1859 aa15.14■□□□□ 0.01
TUBB3-202ENST00000553656 COL4A6Q14031 1691 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 RECQL4O94761 1208 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 AKAP5P24588 427 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 MLH1P40692 756 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 GRM5P41594 1212 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 OSTNP61366 133 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 RNASELQ05823 741 aaKnown RBP15.13■□□□□ 0.01
TUBB3-202ENST00000553656 MCL1Q07820 350 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 KCNA1Q09470 495 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 AGMOQ6ZNB7 445 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 NELFCDQ8IXH7 590 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 THNSL1Q8IYQ7 743 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 GLIS3Q8NEA6 775 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 ZNF507Q8TCN5 953 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 SCFD1Q8WVM8 642 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 ZBTB45Q96K62 511 aaPredicted RBP15.13■□□□□ 0.01
TUBB3-202ENST00000553656 CASD1Q96PB1 797 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 GTPBP4Q9BZE4 634 aaKnown RBP15.13■□□□□ 0.01
TUBB3-202ENST00000553656 GBP3Q9H0R5 595 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 RC3H2Q9HBD1 1191 aaKnown RBP15.13■□□□□ 0.01
TUBB3-202ENST00000553656 RNF19AQ9NV58 838 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 KANSL3Q9P2N6 904 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 RWDD3Q9Y3V2 267 aa15.13■□□□□ 0.01
TUBB3-202ENST00000553656 ZMYM2Q9UBW7 1377 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 RANBP2P49792 3224 aaKnown RBP15.12■□□□□ 0.01
TUBB3-202ENST00000553656 LINC01553A4QN01 128 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 MEIS3P2A8K0S8 358 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 OFD1O75665 1012 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 MBD3O95983 291 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 TAP1Q03518 808 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 STK4Q13043 487 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 GPR153Q6NV75 609 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 EPM2AIP1Q7L775 607 aaPredicted RBP15.12■□□□□ 0.01
TUBB3-202ENST00000553656 KIAA0895Q8NCT3 520 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 GOLGA5Q8TBA6 731 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 SAMD11Q96NU1 681 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 ACAP3Q96P50 834 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 FAM193BQ96PV7 902 aaPredicted RBP15.12■□□□□ 0.01
TUBB3-202ENST00000553656 TGS1Q96RS0 853 aaKnown RBP15.12■□□□□ 0.01
TUBB3-202ENST00000553656 GAD1Q99259 594 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 ZNF576Q9H609 170 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 AAASQ9NRG9 546 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 KLK14Q9P0G3 267 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 PCDHA5Q9Y5H7 936 aa15.12■□□□□ 0.01
TUBB3-202ENST00000553656 MRPL42Q9Y6G3 142 aaKnown RBP15.12■□□□□ 0.01
TUBB3-202ENST00000553656 A0A0B4J269 797 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 ARL5CA6NH57 179 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 ANKRD63C9JTQ0 380 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 ABLIM1O14639 778 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 OGTO15294 1046 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 CLTAP09496 248 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 LAG3P18627 525 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 CTNNB1P35222 781 aa15.11■□□□□ 0.01
TUBB3-202ENST00000553656 FXR1P51114 621 aaKnown RBP eCLIP15.11■□□□□ 0.01
TUBB3-202ENST00000553656 SNRPFP62306 86 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms