RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 POMCP01189 267 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 AFMP43652 599 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 ASIC1P78348 528 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 HERC4Q5GLZ8 1057 aaPredicted RBP25.03■■□□□ 1.6
TDP1-206ENST00000553569 KLHL23Q8NBE8 558 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 MAFAQ8NHW3 353 aaPredicted RBP25.03■■□□□ 1.6
TDP1-206ENST00000553569 RSPH1Q8WYR4 309 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 MRPS27Q92552 414 aaKnown RBP25.03■■□□□ 1.6
TDP1-206ENST00000553569 ZFP42Q96MM3 310 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 TCHPQ9BT92 498 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 TRIM9Q9C026 710 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 MRPL44Q9H9J2 332 aaKnown RBP25.03■■□□□ 1.6
TDP1-206ENST00000553569 SNTG2Q9NY99 539 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 CHMP5Q9NZZ3 219 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 SEL1LQ9UBV2 794 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 TBX20Q9UMR3 447 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 HPSEQ9Y251 543 aa25.03■■□□□ 1.6
TDP1-206ENST00000553569 PLXNA4Q9HCM2 1894 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 TDRD15B5MCY1 1934 aaKnown RBP25.02■■□□□ 1.6
TDP1-206ENST00000553569 A0A1W2PQ27 194 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 A0A1W2PQ64 194 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 A0A1W2PQD8 194 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 ARL5CA6NH57 179 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 ACTN4O43707 911 aaKnown RBP25.02■■□□□ 1.6
TDP1-206ENST00000553569 ZC3H11AO75152 810 aaKnown RBP eCLIP25.02■■□□□ 1.6
TDP1-206ENST00000553569 CASP1P29466 404 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 NDUFA8P51970 172 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 ZC2HC1CQ53FD0 456 aaPredicted RBP25.02■■□□□ 1.6
TDP1-206ENST00000553569 MPZL3Q6UWV2 235 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 CCDC65Q8IXS2 484 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 THNSL1Q8IYQ7 743 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 GRAMD1CQ8IYS0 662 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 PPM1EQ8WY54 764 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 ZBTB45Q96K62 511 aaPredicted RBP25.02■■□□□ 1.6
TDP1-206ENST00000553569 ZNF558Q96NG5 402 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 GOLPH3LQ9H4A5 285 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 ALG13Q9NP73 1137 aaKnown RBP25.02■■□□□ 1.6
TDP1-206ENST00000553569 GDAQ9Y2T3 454 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 GIT1Q9Y2X7 761 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 MTCH2Q9Y6C9 303 aa25.02■■□□□ 1.6
TDP1-206ENST00000553569 FRMD3A2A2Y4 597 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 GRM6O15303 877 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 RECQL4O94761 1208 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 ITGB1P05556 798 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 MATR3P43243 847 aaKnown RBP eCLIP25.01■■□□□ 1.59
TDP1-206ENST00000553569 SYKP43405 635 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 LIG4P49917 911 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 SCNN1GP51170 649 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 COASYQ13057 564 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 KCNT2Q6UVM3 1135 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 SLC17A8Q8NDX2 589 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 P2RX5Q93086 422 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 RPS6KC1Q96S38 1066 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 BLZF1Q9H2G9 400 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 NRDE2Q9H7Z3 1164 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 PTPRHQ9HD43 1115 aa25.01■■□□□ 1.59
TDP1-206ENST00000553569 ATG2AQ2TAZ0 1938 aa25■■□□□ 1.59
TDP1-206ENST00000553569 GOLGA6L4A6NEF3 574 aa25■■□□□ 1.59
TDP1-206ENST00000553569 HNRNPDLO14979 420 aaKnown RBP25■■□□□ 1.59
TDP1-206ENST00000553569 TOM1L1O75674 476 aa25■■□□□ 1.59
TDP1-206ENST00000553569 GCNT3O95395 438 aa25■■□□□ 1.59
TDP1-206ENST00000553569 SLFN14P0C7P3 912 aa25■■□□□ 1.59
TDP1-206ENST00000553569 SCP2P22307 547 aa25■■□□□ 1.59
TDP1-206ENST00000553569 PROZP22891 400 aa25■■□□□ 1.59
TDP1-206ENST00000553569 GTF2BQ00403 316 aa25■■□□□ 1.59
TDP1-206ENST00000553569 CCDC85BQ15834 202 aaPredicted RBP25■■□□□ 1.59
TDP1-206ENST00000553569 ZPBP2Q6X784 338 aa25■■□□□ 1.59
TDP1-206ENST00000553569 ZNF280BQ86YH2 543 aa25■■□□□ 1.59
TDP1-206ENST00000553569 CEP120Q8N960 986 aa25■■□□□ 1.59
TDP1-206ENST00000553569 KCNN1Q92952 543 aa25■■□□□ 1.59
TDP1-206ENST00000553569 FAM193BQ96PV7 902 aaPredicted RBP25■■□□□ 1.59
TDP1-206ENST00000553569 C7orf25Q9BPX7 421 aa25■■□□□ 1.59
TDP1-206ENST00000553569 KANSL3Q9P2N6 904 aa25■■□□□ 1.59
TDP1-206ENST00000553569 PLAGL2Q9UPG8 496 aa25■■□□□ 1.59
TDP1-206ENST00000553569 PRRC2BQ5JSZ5 2229 aaKnown RBP25■■□□□ 1.59
TDP1-206ENST00000553569 FAM237AA0A1B0GTK4 181 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 ABLIM1O14639 778 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 B4GALT3O60512 393 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 FGF18O76093 207 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 MCF2P10911 925 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 ABCD1P33897 745 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 BCAR1P56945 870 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 OSTNP61366 133 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 NOLC1Q14978 699 aaKnown RBP eCLIP24.99■■□□□ 1.59
TDP1-206ENST00000553569 PTPROQ16827 1216 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 CSPP1Q1MSJ5 1256 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 ZNF720Q7Z2F6 126 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 MAP4K3Q8IVH8 894 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 FGFBP2Q9BYJ0 223 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 ST6GALNAC4Q9H4F1 302 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 MIOSQ9NXC5 875 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 DNAJB4Q9UDY4 337 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 USP25Q9UHP3 1055 aa24.99■■□□□ 1.59
TDP1-206ENST00000553569 ZMYM2Q9UBW7 1377 aa24.98■■□□□ 1.59
TDP1-206ENST00000553569 NT5C1B-RDH14C9J2C7 533 aa24.98■■□□□ 1.59
TDP1-206ENST00000553569 INPPL1O15357 1258 aa24.98■■□□□ 1.59
TDP1-206ENST00000553569 MYBP10242 640 aa24.98■■□□□ 1.59
TDP1-206ENST00000553569 CASP5P51878 434 aa24.98■■□□□ 1.59
TDP1-206ENST00000553569 CUL4BQ13620 913 aa24.98■■□□□ 1.59
TDP1-206ENST00000553569 HPS3Q969F9 1004 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms