RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 EDIL3O43854 480 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 POMCP01189 267 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 NCLP19338 710 aaKnown RBP12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 SHC2P98077 582 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 PFKPQ01813 784 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 JAKMIP3Q5VZ66 844 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 LAIR1Q6GTX8 287 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 CATSPER4Q7RTX7 472 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 PIP4P2Q8N4L2 257 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 CELF5Q8N6W0 485 aaKnown RBP12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 RUFY2Q8WXA3 655 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 FGF13Q92913 245 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 FAM217BQ9NTX9 383 aaPredicted RBP12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 SLC12A7Q9Y666 1083 aa12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 V9GY48 417 aaPredicted RBP12.77□□□□□ -0.37
SUPT16H-202ENST00000552829 SGSM2O43147 1006 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 RETP07949 1114 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 NTHL1P78549 312 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 MTAPQ13126 283 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 GRASPQ7Z6J2 395 aaPredicted RBP12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 KSR1Q8IVT5 923 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 SMG8Q8ND04 991 aaKnown RBP12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 GPR62Q9BZJ7 368 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 MIOSQ9NXC5 875 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 SUCLA2Q9P2R7 463 aaPredicted RBP12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 ANGPTL2Q9UKU9 493 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 SAMM50Q9Y512 469 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 RBM8AQ9Y5S9 174 aaKnown RBP12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 GREB1Q4ZG55 1949 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 SPAG17Q6Q759 2223 aa12.76□□□□□ -0.37
SUPT16H-202ENST00000552829 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 TMEM150BA6NC51 233 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 NCAM2O15394 837 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 MAFO75444 373 aaPredicted RBP12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 HNRNPA1P09651 372 aaKnown RBP eCLIP12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 DNM2P50570 870 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 CSRP2Q16527 193 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 PRR16Q569H4 304 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 XKR3Q5GH77 459 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 B3GNT9Q6UX72 402 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 MICU3Q86XE3 530 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 RHPN2Q8IUC4 686 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 B3GALT6Q96L58 329 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 RIT2Q99578 217 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 CHRDQ9H2X0 955 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 SEMA4GQ9NTN9 838 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 TCEAL9Q9UHQ7 104 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 FBXW11Q9UKB1 542 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 SPEGQ15772 3267 aa12.75□□□□□ -0.37
SUPT16H-202ENST00000552829 ESYT2A0FGR8 921 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 ARL5CA6NH57 179 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 TM4SF5O14894 197 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 MSH4O15457 936 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 POU2F2P09086 479 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 RPL17P18621 184 aaKnown RBP12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 HOXA9P31269 272 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 SFNP31947 248 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 OR1G1P47890 313 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 NRLP54845 237 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 ADCY1Q08828 1119 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 USP41Q3LFD5 358 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 MTERF2Q49AM1 385 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 TTC22Q5TAA0 569 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 N4BP2L1Q5TBK1 243 aaPredicted RBP12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 APOA5Q6Q788 366 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 ZNF852Q6ZMS4 543 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 PRR23CQ6ZRP0 262 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 TPRG1Q6ZUI0 275 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 ITFG1Q8TB96 612 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 SLC5A5Q92911 643 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 KXD1Q9BQD3 176 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 LRRC2Q9BYS8 371 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 ZMYND12Q9H0C1 365 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 MINDY3Q9H8M7 445 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 UBN1Q9NPG3 1134 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 RBM28Q9NW13 759 aaKnown RBP12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 RAB23Q9ULC3 237 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 IGF2RP11717 2491 aa12.74□□□□□ -0.37
SUPT16H-202ENST00000552829 VWA8A3KMH1 1905 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 GDF9O60383 454 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 JAK3P52333 1124 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 CREMQ03060 361 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 LPAL2Q16609 132 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 FUT10Q6P4F1 479 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 SRGAP1Q7Z6B7 1085 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 CNNM3Q8NE01 707 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 RDM1Q8NG50 284 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 DDX1Q92499 740 aaKnown RBP12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 GAD1Q99259 594 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 CLSTN3Q9BQT9 956 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 SH2D3AQ9BRG2 576 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 PHF20Q9BVI0 1012 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 COLEC11Q9BWP8 271 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 PLA2G2FQ9BZM2 168 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 UNC45AQ9H3U1 944 aa12.73□□□□□ -0.37
SUPT16H-202ENST00000552829 SEPT9Q9UHD8 586 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms