RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 ADAM12O43184 909 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 NT5C2P49902 561 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 PPP2R5DQ14738 602 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 UBXN11Q5T124 520 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 FAM160B1Q5W0V3 765 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 ELMSAN1Q6PJG2 1045 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 MAP4K3Q8IVH8 894 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 SPEM1Q8N4L4 309 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 RSPH1Q8WYR4 309 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 FAM3CQ92520 227 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 MCRS1Q96EZ8 462 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 IER2Q9BTL4 223 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 LY9Q9HBG7 655 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 FNIP2Q9P278 1114 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 SSX2IPQ9Y2D8 614 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 NEUROG3Q9Y4Z2 214 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 PCDHB2Q9Y5E7 798 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 NCANO14594 1321 aa11.56□□□□□ -0.56
SLC48A1-209ENST00000552003 PDCD11Q14690 1871 aaKnown RBP11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 A0A087WZ62 844 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 hCG_1642624A0A1W2PR95 340 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 MAGEB2O15479 319 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 ZNF862O60290 1169 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 PRB1P04280 392 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 MPLP40238 635 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 OR1G1P47890 313 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 PXNP49023 591 aaPredicted RBP11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 DSC1Q08554 894 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 PTGDRQ13258 359 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 PRSS55Q6UWB4 352 aaPredicted RBP11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 MRPL10Q7Z7H8 261 aaKnown RBP11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 WDR5BQ86VZ2 330 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 CKAP2LQ8IYA6 745 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 ABCA7Q8IZY2 2146 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 NLRP7Q8WX94 980 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 RABGGTAQ92696 567 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 DNASE1L2Q92874 299 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 LOXL4Q96JB6 756 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 MAP7D2Q96T17 732 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 CLSTN3Q9BQT9 956 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 FDXACB1Q9BRP7 624 aaPredicted RBP11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 PIN4Q9Y237 131 aaKnown RBP11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 MSRB2Q9Y3D2 182 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 SPTA1P02549 2419 aa11.55□□□□□ -0.56
SLC48A1-209ENST00000552003 NUP205Q92621 2012 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 MAN2B1O00754 1011 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 C8AP07357 584 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 IRX6P78412 446 aaPredicted RBP11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 AAMPQ13685 434 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 CEP55Q53EZ4 464 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 RTP2Q5QGT7 225 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 CMTR1Q8N1G2 835 aaKnown RBP11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 CEP89Q96ST8 783 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 EDEM2Q9BV94 578 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 RSAD1Q9HA92 442 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 ZNF334Q9HCZ1 680 aaPredicted RBP11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 ANKFY1Q9P2R3 1169 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 CACNG4Q9UBN1 327 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 POLIQ9UNA4 740 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 PIAS3Q9Y6X2 628 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 VWA8A3KMH1 1905 aa11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 TDRD15B5MCY1 1934 aaKnown RBP11.54□□□□□ -0.56
SLC48A1-209ENST00000552003 ARNTLO00327 626 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 CDX4O14627 284 aaPredicted RBP11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 C1QL1O75973 258 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 PLEKHA8P1O95397 391 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 HNRNPA1P09651 372 aaKnown RBP eCLIP11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 CEACAM1P13688 526 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 CEBPBP17676 345 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 CCNE1P24864 410 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 HOXA6P31267 233 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 MIS18BP1Q6P0N0 1132 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 PKN3Q6P5Z2 889 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 KSR1Q8IVT5 923 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 SRBD1Q8N5C6 995 aaKnown RBP11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 URGCPQ8TCY9 931 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 GAB3Q8WWW8 586 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 ELSPBP1Q96BH3 223 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 FAM193BQ96PV7 902 aaPredicted RBP11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 SPZ1Q9BXG8 430 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 KRT23Q9C075 422 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 GABBR1Q9UBS5 961 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 TAF6LQ9Y6J9 622 aa11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 URB1O60287 2271 aaKnown RBP11.53□□□□□ -0.56
SLC48A1-209ENST00000552003 PLXNB3Q9ULL4 1909 aa11.52□□□□□ -0.56
SLC48A1-209ENST00000552003 LNP1A1A4G5 178 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 SPDYE3A6NKU9 549 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 FAM86B1E9PN63 330 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 EXTL3O43909 919 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 FAM86B2P0C5J1 330 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 CSRP1P21291 193 aaKnown RBP11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 TMOD1P28289 359 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 HOXA11P31270 313 aaPredicted RBP11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 KIF5BP33176 963 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 SOX9P48436 509 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 UGCGQ16739 394 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 PABPC1LQ4VXU2 614 aaKnown RBP11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 FAM78AQ5JUQ0 283 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 PPM1LQ5SGD2 360 aa11.52□□□□□ -0.57
SLC48A1-209ENST00000552003 LARP1BQ659C4 914 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms