RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 PLPPR4Q7Z2D5 763 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 TMEM173Q86WV6 379 aaPredicted RBP6.12□□□□□ -1.43
HOXB3-213ENST00000552000 ECHDC2Q86YB7 292 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 ASPMQ8IZT6 3477 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 HELQQ8TDG4 1101 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 RILPL2Q969X0 211 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 ATG2BQ96BY7 2078 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 CHAMP1Q96JM3 812 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 FOXQ1Q9C009 403 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 ZBP1Q9H171 429 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 SFXN1Q9H9B4 322 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 DLGAP2Q9P1A6 1054 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 SLC9A2Q9UBY0 812 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 SIT1Q9Y3P8 196 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 UBIAD1Q9Y5Z9 338 aa6.12□□□□□ -1.43
HOXB3-213ENST00000552000 BPTFQ12830 3046 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 IGSF10Q6WRI0 2623 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 PIK3CDO00329 1044 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 BACH1O14867 736 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 IFIT3O14879 490 aaKnown RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 HBP1O60381 514 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 ZC3H11AO75152 810 aaKnown RBP eCLIP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 LRRN2O75325 713 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 ADRB1P08588 477 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 MYBP10242 640 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 CTSAP10619 480 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 GLULP15104 373 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 ZSCAN20P17040 1043 aaPredicted RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 SDHBP21912 280 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 CRYBB1P53674 252 aaPredicted RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 LMNB2Q03252 620 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 COL9A2Q14055 689 aaPredicted RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 UBE2SQ16763 222 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 IMMTQ16891 758 aaKnown RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 WDR44Q5JSH3 913 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 PHLDB3Q6NSJ2 640 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 CWC27Q6UX04 472 aaKnown RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 FAM43BQ6ZT52 329 aaPredicted RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 TAS1R3Q7RTX0 852 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 CD163Q86VB7 1156 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 SLC44A3Q8N4M1 653 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 METTL13Q8N6R0 699 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 GPR152Q8TDT2 470 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 BCL7CQ8WUZ0 217 aaPredicted RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 ZNF668Q96K58 619 aaPredicted RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 MYADMQ96S97 322 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 SDF4Q9BRK5 362 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 SUV39H2Q9H5I1 410 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 CNNM2Q9H8M5 875 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 JADE2Q9NQC1 790 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 ARHGEF3Q9NR81 526 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 RCAN3Q9UKA8 241 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 USP18Q9UMW8 372 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 IRAK3Q9Y616 596 aa6.11□□□□□ -1.43
HOXB3-213ENST00000552000 ASCC3Q8N3C0 2202 aaKnown RBP6.11□□□□□ -1.43
HOXB3-213ENST00000552000 SPEGQ15772 3267 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 GOLGA4Q13439 2230 aaKnown RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 NOTCH4Q99466 2003 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 PRR5-ARHGAP8B1AHC4 643 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 ZBTB42B2RXF5 422 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 DDX39AO00148 427 aaKnown RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 GPR32O75388 356 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 SSBP05455 408 aaKnown RBP eCLIP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 SRFP11831 508 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 SDSP20132 328 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 KLRC2P26717 231 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 CLCN3P51790 818 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 POLGP54098 1239 aaPredicted RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 ARHGAP8P85298 464 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 CSTF1Q05048 431 aaKnown RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 TROAPQ12815 778 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 PTPN14Q15678 1187 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 LONRF3Q496Y0 759 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 DCLRE1AQ6PJP8 1040 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 TRMT1LQ7Z2T5 733 aaKnown RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 DDX53Q86TM3 631 aaKnown RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 PPFIBP1Q86W92 1011 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 TICAM2Q86XR7 235 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 MAML2Q8IZL2 1156 aaPredicted RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 ST13P5Q8NFI4 369 aaPredicted RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 PJA1Q8NG27 643 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 ATRIPQ8WXE1 791 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 RRP36Q96EU6 259 aaKnown RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 IGSF21Q96ID5 467 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 RTKNQ9BST9 563 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 VN1R3Q9BXE9 311 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 MRPL9Q9BYD2 267 aaKnown RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 PSTPIP2Q9H939 334 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 GPAMQ9HCL2 828 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 KCNH7Q9NS40 1196 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 SPATA6Q9NWH7 488 aaPredicted RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 SMG5Q9UPR3 1016 aaKnown RBP6.1□□□□□ -1.43
HOXB3-213ENST00000552000 PATJQ8NI35 1801 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 KNL1Q8NG31 2342 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 KNTC1P50748 2209 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 ITPR1Q14643 2758 aa6.1□□□□□ -1.43
HOXB3-213ENST00000552000 ASH1LQ9NR48 2969 aaKnown RBP6.09□□□□□ -1.43
HOXB3-213ENST00000552000 COL1A2P08123 1366 aa6.09□□□□□ -1.43
HOXB3-213ENST00000552000 CLUHO75153 1309 aa6.09□□□□□ -1.43
HOXB3-213ENST00000552000 NFASCO94856 1347 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms