RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 CCDC60Q8IWA6 550 aaPredicted RBP8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 FAM114A1Q8IWE2 563 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 GJD3Q8N144 294 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 FIBCD1Q8N539 461 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 GLIS3Q8NEA6 775 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 RDM1Q8NG50 284 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 CDHR1Q96JP9 859 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 SRRTQ9BXP5 876 aaKnown RBP8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 FGFBP2Q9BYJ0 223 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 FAM49AQ9H0Q0 323 aaPredicted RBP8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 NSUN3Q9H649 340 aaKnown RBP8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 ALG13Q9NP73 1137 aaKnown RBP8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 CLDND1Q9NY35 253 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 TAB2Q9NYJ8 693 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 MAGEC2Q9UBF1 373 aaPredicted RBP8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 SLC9A2Q9UBY0 812 aa8.12□□□□□ -1.11
SMARCD1-210ENST00000551352 USP34Q70CQ2 3546 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 NFASCO94856 1347 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ITIH6Q6UXX5 1313 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 IGSF9BQ9UPX0 1349 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ARHGEF35A5YM69 484 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 LGALS16A8MUM7 142 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 WDR64B1ANS9 1081 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 N4BP3O15049 544 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ZBTB39O15060 712 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 MBTPS2O43462 519 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 TBCAO75347 108 aaKnown RBP8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 KIF20AO95235 890 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 GNAT1P11488 350 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 SFNP31947 248 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 QARSP47897 775 aaKnown RBP8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 PAN2Q504Q3 1202 aaKnown RBP8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ZCWPW2Q504Y3 356 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ZNF746Q6NUN9 644 aaPredicted RBP8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 TAF2Q6P1X5 1199 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ABHD15Q6UXT9 468 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 LRRC55Q6ZSA7 311 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 SFR1Q86XK3 245 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 C17orf53Q8N3J3 647 aaPredicted RBP8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 VN1R2Q8NFZ6 395 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 SPPL3Q8TCT6 385 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 SCFD1Q8WVM8 642 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 FAM122AQ96E09 287 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 MSLNLQ96KJ4 702 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 CNOT6LQ96LI5 555 aaKnown RBP8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 TSG101Q99816 390 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 VPS16Q9H269 839 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ZHX3Q9H4I2 956 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 SMARCAD1Q9H4L7 1026 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ZSWIM4Q9H7M6 989 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ERVK-5Q9HDB9 667 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 JPH1Q9HDC5 661 aaPredicted RBP8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 SPTLC3Q9NUV7 552 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 RNF19AQ9NV58 838 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 ERAP1Q9NZ08 941 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 KCND2Q9NZV8 630 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 TBC1D7Q9P0N9 293 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 CLEC1BQ9P126 229 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 TCEAL9Q9UHQ7 104 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 DBR1Q9UK59 544 aaKnown RBP8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 PADI3Q9ULW8 664 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 COL4A3BPQ9Y5P4 624 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 TRPV2Q9Y5S1 764 aa8.11□□□□□ -1.11
SMARCD1-210ENST00000551352 FAM13AO94988 1023 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 FGFR1OPO95684 399 aaKnown RBP8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 RB1P06400 928 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 SKILP12757 684 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 GUCY2CP25092 1073 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 CASP5P51878 434 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 ZNF131P52739 623 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 ADAM15Q13444 863 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 BTG3Q14201 252 aaPredicted RBP8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 NOLC1Q14978 699 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 SMAD2Q15796 467 aaKnown RBP8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 PTPROQ16827 1216 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 BMT2Q1RMZ1 405 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 MTHFD1LQ6UB35 978 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 EPM2AIP1Q7L775 607 aaPredicted RBP8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 C4orf19Q8IY42 314 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 LINC01465Q8N7H1 131 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 KLHL23Q8NBE8 558 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 CCDC112Q8NEF3 446 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 GLG1Q92896 1179 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 CELF4Q9BZC1 486 aaKnown RBP8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 KCTD10Q9H3F6 313 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 OLFML3Q9NRN5 406 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 SEL1LQ9UBV2 794 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 ODF2LQ9ULJ1 636 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 PLAGL2Q9UPG8 496 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 NOC2LQ9Y3T9 749 aaKnown RBP8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 SAMM50Q9Y512 469 aa8.1□□□□□ -1.11
SMARCD1-210ENST00000551352 UBE4BO95155 1302 aa8.09□□□□□ -1.11
SMARCD1-210ENST00000551352 ZDBF2Q9HCK1 2354 aa8.09□□□□□ -1.11
SMARCD1-210ENST00000551352 SMIM35A0A1B0GVV1 85 aa8.09□□□□□ -1.11
SMARCD1-210ENST00000551352 A0A1W2PQC6 194 aa8.09□□□□□ -1.11
SMARCD1-210ENST00000551352 PRR33A8MZF0 331 aa8.09□□□□□ -1.11
SMARCD1-210ENST00000551352 EIF3DO15371 548 aaKnown RBP eCLIP8.09□□□□□ -1.11
SMARCD1-210ENST00000551352 NRDCO43847 1150 aa8.09□□□□□ -1.11
SMARCD1-210ENST00000551352 C22orf31O95567 290 aa8.09□□□□□ -1.11
SMARCD1-210ENST00000551352 TPM2P07951 284 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms