RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 PTPN13Q12923 2485 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 C8AP07357 584 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 CCNE1P24864 410 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 OR1G1P47890 313 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 RTP2Q5QGT7 225 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 FAM160B1Q5W0V3 765 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 GLIS3Q8NEA6 775 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 HNRNPLLQ8WVV9 542 aaKnown RBP15.25■□□□□ 0.03
SNRPF-203ENST00000551316 NLRP7Q8WX94 980 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 LOXL4Q96JB6 756 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 SCLT1Q96NL6 688 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 MAP7D2Q96T17 732 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 DCTPP1Q9H773 170 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 POLR3BQ9NW08 1133 aaPredicted RBP15.25■□□□□ 0.03
SNRPF-203ENST00000551316 PCDHA6Q9UN73 950 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 PCDHA8Q9Y5H6 950 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 U3KPZ7 1027 aaPredicted RBP15.25■□□□□ 0.03
SNRPF-203ENST00000551316 PIEZO2Q9H5I5 2752 aa15.25■□□□□ 0.03
SNRPF-203ENST00000551316 USP9XQ93008 2570 aaPredicted RBP15.24■□□□□ 0.03
SNRPF-203ENST00000551316 SPAARA0A1B0GVQ0 90 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 CDX4O14627 284 aaPredicted RBP15.24■□□□□ 0.03
SNRPF-203ENST00000551316 ZNF213O14771 459 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 DHX15O43143 795 aaKnown RBP15.24■□□□□ 0.03
SNRPF-203ENST00000551316 EXTL3O43909 919 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 ALDH2P05091 517 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 CEACAM1P13688 526 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 MX1P20591 662 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 TXNDC11Q6PKC3 985 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 MAP4K3Q8IVH8 894 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 ABCA7Q8IZY2 2146 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 LRIG1Q96JA1 1093 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 UBAC1Q9BSL1 405 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 BRD9Q9H8M2 597 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 RSAD1Q9HA92 442 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 LY9Q9HBG7 655 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 VPS45Q9NRW7 570 aa15.24■□□□□ 0.03
SNRPF-203ENST00000551316 ATMQ13315 3056 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 CARNS1A5YM72 827 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 PATE3B3GLJ2 98 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 ARNTLO00327 626 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 MAN2B1O00754 1011 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 ZNF623O75123 536 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 RPP40O75818 363 aaKnown RBP15.23■□□□□ 0.03
SNRPF-203ENST00000551316 CSRP1P21291 193 aaKnown RBP15.23■□□□□ 0.03
SNRPF-203ENST00000551316 DSC1Q08554 894 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 TRAF1Q13077 416 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 PABPC1LQ4VXU2 614 aaKnown RBP15.23■□□□□ 0.03
SNRPF-203ENST00000551316 UBXN11Q5T124 520 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 VITQ6UXI7 678 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 CKAP2LQ8IYA6 745 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 SLC7A14Q8TBB6 771 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 URGCPQ8TCY9 931 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 ZNF334Q9HCZ1 680 aaPredicted RBP15.23■□□□□ 0.03
SNRPF-203ENST00000551316 CHST12Q9NRB3 414 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 MIOSQ9NXC5 875 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 FNIP2Q9P278 1114 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 STK39Q9UEW8 545 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 PCDHB2Q9Y5E7 798 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 MAFBQ9Y5Q3 323 aaPredicted RBP15.23■□□□□ 0.03
SNRPF-203ENST00000551316 COL12A1Q99715 3063 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 PTPRBP23467 1997 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 THADAQ6YHU6 1953 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 TEX15Q9BXT5 2789 aa15.23■□□□□ 0.03
SNRPF-203ENST00000551316 A0A087WZ62 844 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 hCG_1642624A0A1W2PR95 340 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 MAFGO15525 162 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 ZNF862O60290 1169 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 FGD1P98174 961 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 SCAPQ12770 1279 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 PPM1LQ5SGD2 360 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 FUT10Q6P4F1 479 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 CACNA2D4Q7Z3S7 1137 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 RSPH1Q8WYR4 309 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 ELSPBP1Q96BH3 223 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 HNRNPABQ99729 332 aaKnown RBP15.22■□□□□ 0.03
SNRPF-203ENST00000551316 CLSTN3Q9BQT9 956 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 FDXACB1Q9BRP7 624 aaPredicted RBP15.22■□□□□ 0.03
SNRPF-203ENST00000551316 SSX2IPQ9Y2D8 614 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 PCDHGA5Q9Y5G8 931 aa15.22■□□□□ 0.03
SNRPF-203ENST00000551316 EIF4E1BA6NMX2 242 aaKnown RBP15.21■□□□□ 0.03
SNRPF-203ENST00000551316 SEC24BO95487 1268 aa15.21■□□□□ 0.03
SNRPF-203ENST00000551316 HNRNPA1P09651 372 aaKnown RBP eCLIP15.21■□□□□ 0.03
SNRPF-203ENST00000551316 GDI1P31150 447 aa15.21■□□□□ 0.03
SNRPF-203ENST00000551316 KIF5BP33176 963 aa15.21■□□□□ 0.03
SNRPF-203ENST00000551316 UGCGQ16739 394 aa15.21■□□□□ 0.03
SNRPF-203ENST00000551316 PLK5Q496M5 336 aa15.21■□□□□ 0.03
SNRPF-203ENST00000551316 FAM78AQ5JUQ0 283 aa15.21■□□□□ 0.03
SNRPF-203ENST00000551316 CHCHD4Q8N4Q1 142 aa15.21■□□□□ 0.03
SNRPF-203ENST00000551316 TCEAL4Q96EI5 215 aa15.21■□□□□ 0.03
SNRPF-203ENST00000551316 FAM193BQ96PV7 902 aaPredicted RBP15.21■□□□□ 0.03
SNRPF-203ENST00000551316 DUSP15Q9H1R2 295 aaPredicted RBP15.21■□□□□ 0.03
SNRPF-203ENST00000551316 ARID2Q68CP9 1835 aa15.2■□□□□ 0.02
SNRPF-203ENST00000551316 TMEM150BA6NC51 233 aa15.2■□□□□ 0.02
SNRPF-203ENST00000551316 DCLK1O15075 740 aa15.2■□□□□ 0.02
SNRPF-203ENST00000551316 PLEKHA8P1O95397 391 aa15.2■□□□□ 0.02
SNRPF-203ENST00000551316 C1RP00736 705 aa15.2■□□□□ 0.02
SNRPF-203ENST00000551316 SCNN1GP51170 649 aa15.2■□□□□ 0.02
SNRPF-203ENST00000551316 FAM193AP78312 1265 aa15.2■□□□□ 0.02
SNRPF-203ENST00000551316 LIN9Q5TKA1 542 aa15.2■□□□□ 0.02
SNRPF-203ENST00000551316 DAB2IPQ5VWQ8 1189 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms