RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 HEBP1Q9NRV9 189 aa11.46□□□□□ -0.57
BEST3-210ENST00000551160 MIOSQ9NXC5 875 aa11.46□□□□□ -0.57
BEST3-210ENST00000551160 FBXW11Q9UKB1 542 aa11.46□□□□□ -0.57
BEST3-210ENST00000551160 RAB23Q9ULC3 237 aa11.46□□□□□ -0.57
BEST3-210ENST00000551160 BRPF3Q9ULD4 1205 aa11.46□□□□□ -0.57
BEST3-210ENST00000551160 HES2Q9Y543 173 aa11.46□□□□□ -0.57
BEST3-210ENST00000551160 ARL5CA6NH57 179 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 C1RP00736 705 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 RETP07949 1114 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 ITGA4P13612 1032 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 PMLP29590 882 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 SFNP31947 248 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 RTP2Q5QGT7 225 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 LRCH2Q5VUJ6 765 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 ZNF852Q6ZMS4 543 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 SYNE3Q6ZMZ3 975 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 PRR23CQ6ZRP0 262 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 NPAS3Q8IXF0 933 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 ING5Q8WYH8 240 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 SLC5A5Q92911 643 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 TCEANC2Q96MN5 208 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 RIT2Q99578 217 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 FAM126AQ9BYI3 521 aaPredicted RBP11.45□□□□□ -0.58
BEST3-210ENST00000551160 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.45□□□□□ -0.58
BEST3-210ENST00000551160 SEMA4GQ9NTN9 838 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 FNIP2Q9P278 1114 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 CACNG4Q9UBN1 327 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 POLIQ9UNA4 740 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 IPPQ9Y573 584 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 COL4A3BPQ9Y5P4 624 aa11.45□□□□□ -0.58
BEST3-210ENST00000551160 ESYT2A0FGR8 921 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 DDX11L8A8MPP1 907 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 MAFO75444 373 aaPredicted RBP11.44□□□□□ -0.58
BEST3-210ENST00000551160 C8AP07357 584 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 SRGAP2CP0DJJ0 459 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 CDC27P30260 824 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 ADCY1Q08828 1119 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 PFKFB3Q16875 520 aaPredicted RBP11.44□□□□□ -0.58
BEST3-210ENST00000551160 USP41Q3LFD5 358 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 PPM1LQ5SGD2 360 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 N4BP2L1Q5TBK1 243 aaPredicted RBP11.44□□□□□ -0.58
BEST3-210ENST00000551160 LIN9Q5TKA1 542 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 MIER3Q7Z3K6 550 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 ZNF687Q8N1G0 1237 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 CCDC136Q96JN2 1154 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 COLEC11Q9BWP8 271 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 APOL6Q9BWW8 343 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 TEKT3Q9BXF9 490 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 PLA2G2FQ9BZM2 168 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 ZMYND12Q9H0C1 365 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 CHRDQ9H2X0 955 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 BMP2KQ9NSY1 1161 aaPredicted RBP11.44□□□□□ -0.58
BEST3-210ENST00000551160 HCFC1R1Q9NWW0 138 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 NDRG2Q9UN36 371 aaKnown RBP11.44□□□□□ -0.58
BEST3-210ENST00000551160 PATJQ8NI35 1801 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 PKD1L2Q7Z442 2459 aa11.44□□□□□ -0.58
BEST3-210ENST00000551160 GOLGA8AA7E2F4 631 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 GOLGA8BA8MQT2 603 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 NCAM2O15394 837 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 ADAM12O43184 909 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 ZBTB43O43298 467 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 LRP3O75074 770 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 PSMD10O75832 226 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 HNRNPA1P09651 372 aaKnown RBP eCLIP11.43□□□□□ -0.58
BEST3-210ENST00000551160 NPEPPSP55786 919 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 CREMQ03060 361 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 SRSF5Q13243 272 aaKnown RBP11.43□□□□□ -0.58
BEST3-210ENST00000551160 CSRP2Q16527 193 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 CREB3L3Q68CJ9 461 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 POTEHQ6S545 545 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 ANO5Q75V66 913 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 SRGAP1Q7Z6B7 1085 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 GPR65Q8IYL9 337 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 CELF5Q8N6W0 485 aaKnown RBP11.43□□□□□ -0.58
BEST3-210ENST00000551160 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
BEST3-210ENST00000551160 SLC7A14Q8TBB6 771 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 TMEM143Q96AN5 459 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 CPB2Q96IY4 423 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 NELL2Q99435 816 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 CLSTN3Q9BQT9 956 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 LSG1Q9H089 658 aaKnown RBP11.43□□□□□ -0.58
BEST3-210ENST00000551160 C6orf50Q9HD87 102 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 UBN1Q9NPG3 1134 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 SH2B1Q9NRF2 756 aaPredicted RBP11.43□□□□□ -0.58
BEST3-210ENST00000551160 ADAM28Q9UKQ2 775 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 MRPS17Q9Y2R5 130 aaKnown RBP11.43□□□□□ -0.58
BEST3-210ENST00000551160 F5P12259 2224 aa11.43□□□□□ -0.58
BEST3-210ENST00000551160 ANKRD11Q6UB99 2663 aaPredicted RBP11.42□□□□□ -0.58
BEST3-210ENST00000551160 TSPAN1O60635 241 aa11.42□□□□□ -0.58
BEST3-210ENST00000551160 XYLBO75191 536 aa11.42□□□□□ -0.58
BEST3-210ENST00000551160 NR1I2O75469 434 aa11.42□□□□□ -0.58
BEST3-210ENST00000551160 SHC2P98077 582 aa11.42□□□□□ -0.58
BEST3-210ENST00000551160 LAMTOR4Q0VGL1 99 aa11.42□□□□□ -0.58
BEST3-210ENST00000551160 SIM2Q14190 667 aaPredicted RBP11.42□□□□□ -0.58
BEST3-210ENST00000551160 PABPC1LQ4VXU2 614 aaKnown RBP11.42□□□□□ -0.58
BEST3-210ENST00000551160 B3GNT9Q6UX72 402 aa11.42□□□□□ -0.58
BEST3-210ENST00000551160 GSTCDQ8NEC7 633 aa11.42□□□□□ -0.58
BEST3-210ENST00000551160 RDM1Q8NG50 284 aa11.42□□□□□ -0.58
BEST3-210ENST00000551160 HASPINQ8TF76 798 aa11.42□□□□□ -0.58
BEST3-210ENST00000551160 PRPF31Q8WWY3 499 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms