RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 RXFP1Q9HBX9 757 aa17.27■□□□□ 0.36
TCHP-208ENST00000549550 ARL5CA6NH57 179 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 LAMP2P13473 410 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 ITGA4P13612 1032 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 GJB2P29033 226 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 DSG1Q02413 1049 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 PUM1Q14671 1186 aaKnown RBP eCLIP17.26■□□□□ 0.35
TCHP-208ENST00000549550 PALB2Q86YC2 1186 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 ST13P5Q8NFI4 369 aaPredicted RBP17.26■□□□□ 0.35
TCHP-208ENST00000549550 HDAC7Q8WUI4 952 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 PSPC1Q8WXF1 523 aaKnown RBP17.26■□□□□ 0.35
TCHP-208ENST00000549550 RUBCNQ92622 972 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 B3GALT6Q96L58 329 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 NT5C3AQ9H0P0 336 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 UBN1Q9NPG3 1134 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 SH3GLB2Q9NR46 395 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.26■□□□□ 0.35
TCHP-208ENST00000549550 COL4A3Q01955 1670 aa17.26■□□□□ 0.35
TCHP-208ENST00000549550 CACNA1BQ00975 2339 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 ANHXE9PGG2 379 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 EML1O00423 815 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 PAPLNO95428 1278 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 IFNAR1P17181 557 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 MLH1P40692 756 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 DSC1Q08554 894 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 ST3GAL1Q11201 340 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 SCRN1Q12765 414 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 HTR4Q13639 388 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 DCLRE1AQ6PJP8 1040 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 POTEGQ6S5H5 508 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 DCLK2Q8N568 766 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 PJA1Q8NG27 643 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 CEP170P1Q96L14 293 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 ZFP42Q96MM3 310 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 GAD1Q99259 594 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 FOXQ1Q9C009 403 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 PLEKHA4Q9H4M7 779 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 DHX33Q9H6R0 707 aaKnown RBP17.25■□□□□ 0.35
TCHP-208ENST00000549550 SLC2A4RGQ9NR83 387 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 BMP2KQ9NSY1 1161 aaPredicted RBP17.25■□□□□ 0.35
TCHP-208ENST00000549550 ZDHHC7Q9NXF8 308 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 PCDHA4Q9UN74 947 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 IPPQ9Y573 584 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 NUMBLQ9Y6R0 609 aa17.25■□□□□ 0.35
TCHP-208ENST00000549550 EPG5Q9HCE0 2579 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 POTEMA6NI47 508 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 GOLGA6L22H0YM25 854 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 CPLX1O14810 134 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 TGM5O43548 720 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 STX6O43752 255 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 GAS2O43903 313 aaKnown RBP17.24■□□□□ 0.35
TCHP-208ENST00000549550 ERLIN2O94905 339 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 GLULP15104 373 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 QARSP47897 775 aaKnown RBP17.24■□□□□ 0.35
TCHP-208ENST00000549550 SCNN1GP51170 649 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 GLYCTKQ8IVS8 523 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 RNF149Q8NC42 400 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 MBOAT7Q96N66 472 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 EIF2AQ9BY44 585 aaKnown RBP17.24■□□□□ 0.35
TCHP-208ENST00000549550 PRKD2Q9BZL6 878 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 NCOA5Q9HCD5 579 aaKnown RBP17.24■□□□□ 0.35
TCHP-208ENST00000549550 CHST7Q9NS84 486 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 MIOSQ9NXC5 875 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 WRAP73Q9P2S5 460 aaPredicted RBP17.24■□□□□ 0.35
TCHP-208ENST00000549550 DDX25Q9UHL0 483 aaKnown RBP17.24■□□□□ 0.35
TCHP-208ENST00000549550 HES2Q9Y543 173 aa17.24■□□□□ 0.35
TCHP-208ENST00000549550 NR1I2O75469 434 aa17.23■□□□□ 0.35
TCHP-208ENST00000549550 RFC5P40937 340 aa17.23■□□□□ 0.35
TCHP-208ENST00000549550 CCT2P78371 535 aaKnown RBP17.23■□□□□ 0.35
TCHP-208ENST00000549550 MOXD1Q6UVY6 613 aa17.23■□□□□ 0.35
TCHP-208ENST00000549550 EXOC8Q8IYI6 725 aa17.23■□□□□ 0.35
TCHP-208ENST00000549550 NSUN7Q8NE18 718 aaKnown RBP17.23■□□□□ 0.35
TCHP-208ENST00000549550 LARP6Q9BRS8 491 aaKnown RBP17.23■□□□□ 0.35
TCHP-208ENST00000549550 GPR62Q9BZJ7 368 aa17.23■□□□□ 0.35
TCHP-208ENST00000549550 DLL3Q9NYJ7 618 aa17.23■□□□□ 0.35
TCHP-208ENST00000549550 KMT2BQ9UMN6 2715 aaPredicted RBP17.23■□□□□ 0.35
TCHP-208ENST00000549550 GPR179Q6PRD1 2367 aa17.23■□□□□ 0.35
TCHP-208ENST00000549550 STK36Q9NRP7 1315 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 M0R2N6 131 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 SLC37A4O43826 429 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 TSPAN1O60635 241 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 DKC1O60832 514 aaKnown RBP eCLIP17.22■□□□□ 0.35
TCHP-208ENST00000549550 LRRN2O75325 713 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 C1RP00736 705 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 SYT1P21579 422 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 STARD6P59095 220 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 STK3Q13188 491 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 PPP2R5CQ13362 524 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 EMC2Q15006 297 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 NOTUMQ6P988 496 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 LILRA6Q6PI73 481 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 FERMT3Q86UX7 667 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 MAML2Q8IZL2 1156 aaPredicted RBP17.22■□□□□ 0.35
TCHP-208ENST00000549550 BLIDQ8IZY5 108 aa17.22■□□□□ 0.35
TCHP-208ENST00000549550 FAM184AQ8NB25 1140 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms