RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TYMPP19971 482 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 CRYBB1P53674 252 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PURAQ00577 322 aaKnown RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 DSC1Q08554 894 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 STILQ15468 1287 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 TRIM72Q6ZMU5 477 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 CABP7Q86V35 215 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 SEPT1Q8WYJ6 367 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 P2RX5Q93086 422 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 WRNIP1Q96S55 665 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 RNF14Q9UBS8 474 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 SLC9A2Q9UBY0 812 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 TMEM59LQ9UK28 342 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 TTC3P53804 2025 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 CLUHO75153 1309 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 A0A1B0GUA9 196 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 SRRM3A6NNA2 597 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 GABRDO14764 452 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 CCP110O43303 1012 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 HMGCRP04035 888 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 CYP1A1P04798 512 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 ATF4P18848 351 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 HOXA9P31269 272 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 FCGRTP55899 365 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 MYL6P60660 151 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 RPS6P62753 249 aaKnown RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 MYL5Q02045 173 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 DNM1Q05193 864 aaKnown RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 LRRC38Q5VT99 294 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 BICDL1Q6ZP65 573 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 ZDHHC17Q8IUH5 632 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 RASGEF1CQ8N431 466 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 CMASQ8NFW8 434 aaPredicted RBP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 ZNF333Q96JL9 665 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 ISCUQ9H1K1 167 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 NUP62CLQ9H1M0 184 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 RGS18Q9NS28 235 aa5.37□□□□□ -1.55
SCAF11-212ENST00000549162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCAF11-212ENST00000549162 PDHXO00330 501 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 N4BP3O15049 544 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 COBLO75128 1261 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 DDNO94850 711 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 F12P00748 615 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 FCER1AP12319 257 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 WARSP23381 471 aaKnown RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 CTGFP29279 349 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 MAP2K1Q02750 393 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 CREMQ03060 361 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TYRO3Q06418 890 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 RAB41Q5JT25 222 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 CRELD2Q6UXH1 353 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 UNC93AQ86WB7 457 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 BRSK2Q8IWQ3 736 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 SCFD1Q8WVM8 642 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 FAF2Q96CS3 445 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 DDX11Q96FC9 970 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 FTHL17Q9BXU8 183 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TXNRD2Q9NNW7 524 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 PLAGL2Q9UPG8 496 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 EXOC7Q9UPT5 735 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 WASH4PA8MWX3 477 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 MEFVO15553 781 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 EXTL3O43909 919 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 NPTXRO95502 500 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 IGLV3-25P01717 112 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 C4BPAP04003 597 aaKnown RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 MYBL1P10243 752 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TSHRP16473 764 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 HOXD10P28358 340 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 RPL9P32969 192 aaKnown RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 MAGEA11P43364 429 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 DNM2P50570 870 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 POLGP54098 1239 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 NAPAP54920 295 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 CYP1B1Q16678 543 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 MSL1Q68DK7 614 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 C11orf63Q6NUN7 778 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 SMIM5Q71RC9 77 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 ANO5Q75V66 913 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 POTEDQ86YR6 584 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TRPV1Q8NER1 839 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 CRELD1Q96HD1 420 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 JPH1Q9HDC5 661 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 CYP26B1Q9NR63 512 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 PRMT7Q9NVM4 692 aaPredicted RBP5.36□□□□□ -1.55
SCAF11-212ENST00000549162 ABCF2Q9UG63 623 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 PCDHGA11Q9Y5H2 935 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 ADAMTS9Q9P2N4 1935 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 SHTN1A0MZ66 631 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 MYMKA6NI61 221 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TMEM232C9JQI7 657 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 ACKR2O00590 384 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 FZD6O60353 706 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 TXLNAP40222 546 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 SYKP43405 635 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 GJA8P48165 433 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 EPHA5P54756 1037 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 UBE3AQ05086 875 aa5.36□□□□□ -1.55
SCAF11-212ENST00000549162 COASYQ13057 564 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms