RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 RAP1GAPP47736 663 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 AGFG1P52594 562 aaKnown RBP5.25□□□□□ -1.57
PTCH1-216ENST00000548379 SLURP1P55000 103 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 ATP8B2P98198 1209 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 CDC42EP1Q00587 391 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 PPP4R3AQ6IN85 833 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 GPR155Q7Z3F1 870 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 SRGAP1Q7Z6B7 1085 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 CCAR1Q8IX12 1150 aaKnown RBP5.25□□□□□ -1.57
PTCH1-216ENST00000548379 KIAA0319LQ8IZA0 1049 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 KAT5Q92993 513 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 MRGPRX4Q96LA9 322 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 ZNF700Q9H0M5 742 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 TLR9Q9NR96 1032 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 ING3Q9NXR8 418 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 GPRC5DQ9NZD1 345 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 PCDHA13Q9Y5I0 950 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 RBM8AQ9Y5S9 174 aaKnown RBP5.25□□□□□ -1.57
PTCH1-216ENST00000548379 SLC4A7Q9Y6M7 1214 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 MROH2BQ7Z745 1585 aa5.25□□□□□ -1.57
PTCH1-216ENST00000548379 WDR62O43379 1518 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 MROH6A6NGR9 719 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 MATN2O00339 956 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 PAX4O43316 350 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 NOBOXO60393 691 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 TOX4O94842 621 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 ZBED1O96006 694 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 AMY1AP04745 511 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 JUNP05412 331 aaKnown RBP5.24□□□□□ -1.57
PTCH1-216ENST00000548379 RHCEP18577 417 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 ADSLP30566 484 aaPredicted RBP5.24□□□□□ -1.57
PTCH1-216ENST00000548379 MAP2K6P52564 334 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 RRADP55042 308 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 ATP2C1P98194 919 aaPredicted RBP5.24□□□□□ -1.57
PTCH1-216ENST00000548379 RHDQ02161 417 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 TARDBPQ13148 414 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTCH1-216ENST00000548379 UBE4AQ14139 1066 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 RNF151Q2KHN1 245 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 RALYLQ86SE5 291 aaKnown RBP5.24□□□□□ -1.57
PTCH1-216ENST00000548379 TTC7BQ86TV6 843 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 TRMT2AQ8IZ69 625 aaKnown RBP5.24□□□□□ -1.57
PTCH1-216ENST00000548379 IFI44Q8TCB0 444 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 GCDHQ92947 438 aaPredicted RBP5.24□□□□□ -1.57
PTCH1-216ENST00000548379 TTC17Q96AE7 1141 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 CYFIP2Q96F07 1278 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 SAMD11Q96NU1 681 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 CGRRF1Q99675 332 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 PTPN18Q99952 460 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 PDCD2LQ9BRP1 358 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 MAN1C1Q9NR34 630 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 FANCD2Q9BXW9 1451 aa5.24□□□□□ -1.57
PTCH1-216ENST00000548379 FAM227AF5H4B4 570 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 WNT10BO00744 389 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 TPP1O14773 563 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 B4GALT3O60512 393 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 GYPEP15421 78 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 PHKG2P15735 406 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 HK3P52790 923 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 SLC4A10Q6U841 1118 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 RHOT1Q8IXI2 618 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 KBTBD2Q8IY47 623 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 DRC7Q8IY82 874 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 ZDHHC14Q8IZN3 488 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 ZGPATQ8N5A5 531 aaKnown RBP5.23□□□□□ -1.57
PTCH1-216ENST00000548379 PJA1Q8NG27 643 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 RABGGTAQ92696 567 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 RGMAQ96B86 450 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 GPHA2Q96T91 129 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 MANSC1Q9H8J5 431 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 KMT5AQ9NQR1 393 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 CHST12Q9NRB3 414 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 CALCOCO1Q9P1Z2 691 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 FAM184BQ9ULE4 1060 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 L1RE1Q9UN81 338 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 ZDHHC9Q9Y397 364 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 ATRNL1Q5VV63 1379 aa5.23□□□□□ -1.57
PTCH1-216ENST00000548379 ANO9A1A5B4 782 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 ADCY6O43306 1168 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 ITGA10O75578 1167 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 CNOT4O95628 575 aaKnown RBP5.22□□□□□ -1.57
PTCH1-216ENST00000548379 RPLP2P05387 115 aaKnown RBP5.22□□□□□ -1.57
PTCH1-216ENST00000548379 MYBP10242 640 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 HTR1BP28222 390 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 BPIFB4P59827 614 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 MTM1Q13496 603 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 SAFB2Q14151 953 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTCH1-216ENST00000548379 RAB39AQ14964 217 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 VMACQ2NL98 169 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 THEMIS2Q5TEJ8 643 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 TCERG1LQ5VWI1 586 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 ZNF572Q7Z3I7 529 aaPredicted RBP5.22□□□□□ -1.57
PTCH1-216ENST00000548379 ADGRE4PQ86SQ3 457 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 PQLC1Q8N2U9 271 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 CAMKK1Q8N5S9 505 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 OR14K1Q8NGZ2 314 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 CASKIN2Q8WXE0 1202 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 FAM204AQ9H8W3 233 aa5.22□□□□□ -1.57
PTCH1-216ENST00000548379 MSL2Q9HCI7 577 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms