RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 ADPGKQ9BRR6 497 aa22.84■■□□□ 1.25
GPN3-205ENST00000547323 PBX4Q9BYU1 374 aa22.84■■□□□ 1.25
GPN3-205ENST00000547323 YBX2Q9Y2T7 364 aaKnown RBP22.84■■□□□ 1.25
GPN3-205ENST00000547323 SOX1O00570 391 aaPredicted RBP22.83■■□□□ 1.25
GPN3-205ENST00000547323 EIF3DO15371 548 aaKnown RBP eCLIP22.83■■□□□ 1.25
GPN3-205ENST00000547323 SKIP12755 728 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 AKAP5P24588 427 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 MATR3P43243 847 aaKnown RBP eCLIP22.83■■□□□ 1.25
GPN3-205ENST00000547323 HTRA4P83105 476 aaPredicted RBP22.83■■□□□ 1.25
GPN3-205ENST00000547323 SEZ6Q53EL9 994 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 STXBP4Q6ZWJ1 553 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 SMYD4Q8IYR2 804 aaPredicted RBP22.83■■□□□ 1.25
GPN3-205ENST00000547323 SYCP3Q8IZU3 236 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 CEP120Q8N960 986 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 GSDMAQ96QA5 445 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 RAD9AQ99638 391 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 SNTG2Q9NY99 539 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 MAN1B1Q9UKM7 699 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 MAPK8IP1Q9UQF2 711 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 ZMYM2Q9UBW7 1377 aa22.83■■□□□ 1.25
GPN3-205ENST00000547323 TRIP11Q15643 1979 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 CLDN3O15551 220 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 ITGA4P13612 1032 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 OSTNP61366 133 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 DCAF4L1Q3SXM0 396 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 PAN2Q504Q3 1202 aaKnown RBP22.82■■□□□ 1.24
GPN3-205ENST00000547323 TMEM192Q8IY95 271 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 HELQQ8TDG4 1101 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 ZNF689Q96CS4 500 aaPredicted RBP22.82■■□□□ 1.24
GPN3-205ENST00000547323 YME1L1Q96TA2 773 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 RC3H2Q9HBD1 1191 aaKnown RBP22.82■■□□□ 1.24
GPN3-205ENST00000547323 EXOC7Q9UPT5 735 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 PCDHA11Q9Y5I1 949 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 LAMA3Q16787 3333 aa22.82■■□□□ 1.24
GPN3-205ENST00000547323 BIN1O00499 593 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 ARHGEF15O94989 841 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 MCF2P10911 925 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 ADSSP30520 456 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 AFF1P51825 1210 aaKnown RBP22.81■■□□□ 1.24
GPN3-205ENST00000547323 SMAD3P84022 425 aaKnown RBP22.81■■□□□ 1.24
GPN3-205ENST00000547323 MCL1Q07820 350 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 NOLC1Q14978 699 aaKnown RBP eCLIP22.81■■□□□ 1.24
GPN3-205ENST00000547323 BMT2Q1RMZ1 405 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 HABP4Q5JVS0 413 aaKnown RBP22.81■■□□□ 1.24
GPN3-205ENST00000547323 THNSL1Q8IYQ7 743 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 PGBD4Q96DM1 585 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 CASD1Q96PB1 797 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 CXCL16Q9H2A7 254 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 RNF216Q9NWF9 866 aaPredicted RBP22.81■■□□□ 1.24
GPN3-205ENST00000547323 RMND1Q9NWS8 449 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 KLK14Q9P0G3 267 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 INSL6Q9Y581 213 aa22.81■■□□□ 1.24
GPN3-205ENST00000547323 A0A0B4J269 797 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 TBKBP1A7MCY6 615 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 TGFB1I1O43294 461 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 OFD1O75665 1012 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 ZBTB41Q5SVQ8 909 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 ZSWIM2Q8NEG5 633 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 NUP62CLQ9H1M0 184 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 NKX2-4Q9H2Z4 354 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 TMEM206Q9H813 350 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 KIAA1468Q9P260 1216 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 PARP2Q9UGN5 583 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 STYXL1Q9Y6J8 313 aa22.8■■□□□ 1.24
GPN3-205ENST00000547323 CA3P07451 260 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 BMP6P22004 513 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 KNOP1Q1ED39 458 aaKnown RBP22.79■■□□□ 1.24
GPN3-205ENST00000547323 ZNF658Q5TYW1 1059 aaPredicted RBP22.79■■□□□ 1.24
GPN3-205ENST00000547323 APBB1IPQ7Z5R6 666 aaPredicted RBP22.79■■□□□ 1.24
GPN3-205ENST00000547323 SPRED2Q7Z698 418 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 LRCH3Q96II8 777 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 ZFP42Q96MM3 310 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 GAD1Q99259 594 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 MSTO1Q9BUK6 570 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 RSAD1Q9HA92 442 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 MIOSQ9NXC5 875 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 HCSTQ9UBK5 93 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 MSRAQ9UJ68 235 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 INPP5FQ9Y2H2 1132 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 UBE4BO95155 1302 aa22.79■■□□□ 1.24
GPN3-205ENST00000547323 MEFVO15553 781 aaPredicted RBP22.78■■□□□ 1.24
GPN3-205ENST00000547323 FAM189A1O60320 539 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 RECQL4O94761 1208 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 MBD3O95983 291 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 TNFSF9P41273 254 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 GRM5P41594 1212 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 BTG3Q14201 252 aaPredicted RBP22.78■■□□□ 1.24
GPN3-205ENST00000547323 RAB30Q15771 203 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 SLFN12LQ6IEE8 588 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 LRRC55Q6ZSA7 311 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 SP7Q8TDD2 431 aaPredicted RBP22.78■■□□□ 1.24
GPN3-205ENST00000547323 POMGNT1Q8WZA1 660 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 CBWD1Q9BRT8 395 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 TMEM117Q9H0C3 514 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 GBP3Q9H0R5 595 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 PCIF1Q9H4Z3 704 aa22.78■■□□□ 1.24
GPN3-205ENST00000547323 CITO14578 2027 aa22.77■■□□□ 1.24
GPN3-205ENST00000547323 ARL5CA6NH57 179 aa22.77■■□□□ 1.24
GPN3-205ENST00000547323 CLIC2O15247 247 aa22.77■■□□□ 1.24
GPN3-205ENST00000547323 HOXA2O43364 376 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms