RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 MATR3P43243 847 aaKnown RBP eCLIP18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 MRPS6P82932 125 aaKnown RBP18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 PCBP1Q15365 356 aaKnown RBP eCLIP18.41■□□□□ 0.542e-6■■■■□ 25.6
ARFGAP1-220ENST00000547204 AMHR2Q16671 573 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 TMEM132AQ24JP5 1023 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 ATF7IP2Q5U623 682 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 RPAINQ86UA6 219 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 VSTM4Q8IW00 320 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 GPD1LQ8N335 351 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 SAAL1Q96ER3 474 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 FBXL18Q96ME1 805 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 OSMRQ99650 979 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 NDST4Q9H3R1 872 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 KIAA1586Q9HCI6 787 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 AGO2Q9UKV8 859 aaKnown RBP18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 NOD1Q9Y239 953 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 GINS2Q9Y248 185 aa18.41■□□□□ 0.54
ARFGAP1-220ENST00000547204 A0A0B4J269 797 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 GOLGA8IPA6NC78 632 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 GOLGA8JA6NMD2 632 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 CLDN3O15551 220 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 B4GALT5O43286 388 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 EXTL3O43909 919 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 TSPAN1O60635 241 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 CSDE1O75534 798 aaKnown RBP18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 ERLIN2O94905 339 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 KRT13P13646 458 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 PROZP22891 400 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 CRYBB1P53674 252 aaPredicted RBP18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 UBXN1Q04323 297 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 PTK7Q13308 1070 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 SNRNP35Q16560 246 aaKnown RBP18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 FKBP15Q5T1M5 1219 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 MPZL3Q6UWV2 235 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 INTS8Q75QN2 995 aaKnown RBP18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 ZSWIM2Q8NEG5 633 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 ZBTB45Q96K62 511 aaPredicted RBP18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 MSTO1Q9BUK6 570 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 CDHR5Q9HBB8 845 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 TNFSF13BQ9Y275 285 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 TRPV2Q9Y5S1 764 aa18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 LAMA2P24043 3122 aaKnown RBP18.4■□□□□ 0.54
ARFGAP1-220ENST00000547204 ARVCFO00192 962 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 ABLIM1O14639 778 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 LDHAP00338 332 aaKnown RBP18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 SFPQP23246 707 aaKnown RBP eCLIP18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 EIF4BP23588 611 aaKnown RBP18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 PBX1P40424 430 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 TLE2Q04725 743 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 MCL1Q07820 350 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 LRIT3Q3SXY7 679 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 DCAF17Q5H9S7 520 aaPredicted RBP18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 TMC6Q7Z403 805 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 CBWD2Q8IUF1 395 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 RDH13Q8NBN7 331 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 SPC24Q8NBT2 197 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 WNT8BQ93098 351 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 TCHPQ9BT92 498 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 CELF4Q9BZC1 486 aaKnown RBP18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 HAPLN2Q9GZV7 340 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 PTPRHQ9HD43 1115 aa18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 TRMT13Q9NUP7 481 aaKnown RBP18.39■□□□□ 0.53
ARFGAP1-220ENST00000547204 A0A1W2PQC6 194 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 GOLGA6L6A8MZA4 724 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 PQBP1O60828 265 aaKnown RBP18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 AFPP02771 609 aaKnown RBP18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 ADRB2P07550 413 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 BFSP1Q12934 665 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 NOLC1Q14978 699 aaKnown RBP eCLIP18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 ZNF568Q3ZCX4 644 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 TCERG1LQ5VWI1 586 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 CATSPER4Q7RTX7 472 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 SLC35C1Q96A29 364 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 FAM213AQ9BRX8 229 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 CDY2AQ9Y6F7 541 aa18.38■□□□□ 0.53
ARFGAP1-220ENST00000547204 ITIH6Q6UXX5 1313 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 ZNF233A6NK53 670 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 HARSP12081 509 aaKnown RBP18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 ARF4P18085 180 aaPredicted RBP18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 FGFR4P22455 802 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 THPOP40225 353 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 ENPEPQ07075 957 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 NCBP1Q09161 790 aaKnown RBP18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 KCNH2Q12809 1159 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 PTPN21Q16825 1174 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 EEF1DP3Q658K8 133 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 SPECC1LQ69YQ0 1117 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 ZBTB33Q86T24 672 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 TMEM40Q8WWA1 233 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 DHX38Q92620 1227 aaKnown RBP18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 MFSD14AQ96MC6 490 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 PDZD7Q9H5P4 517 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 IMPACTQ9P2X3 320 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 LTBP2Q14767 1821 aa18.37■□□□□ 0.53
ARFGAP1-220ENST00000547204 TRIM43BA6NCK2 446 aa18.36■□□□□ 0.53
ARFGAP1-220ENST00000547204 OGTO15294 1046 aa18.36■□□□□ 0.53
ARFGAP1-220ENST00000547204 CAND2O75155 1236 aa18.36■□□□□ 0.53
ARFGAP1-220ENST00000547204 PTMAP06454 111 aaKnown RBP18.36■□□□□ 0.53
ARFGAP1-220ENST00000547204 CLTBP09497 229 aa18.36■□□□□ 0.53
ARFGAP1-220ENST00000547204 CTSHP09668 335 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms