RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 FRYQ5TBA9 3013 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 F5P12259 2224 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 ARL5CA6NH57 179 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 GOLGA8AA7E2F4 631 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 GOLGA8BA8MQT2 603 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 SLC30A4O14863 429 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 ZBTB43O43298 467 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 PSMD10O75832 226 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 C1RP00736 705 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 TDGF1P13385 188 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 SFNP31947 248 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 MLH1P40692 756 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 AAMPQ13685 434 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 NECTIN1Q15223 517 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 ZBTB41Q5SVQ8 909 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 LRCH2Q5VUJ6 765 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 PLA2G4FQ68DD2 849 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 FUT10Q6P4F1 479 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 POTEHQ6S545 545 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 PRSS55Q6UWB4 352 aaPredicted RBP10.53□□□□□ -0.72
CHD4-212ENST00000545083 B3GNT9Q6UX72 402 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 RSPO2Q6UXX9 243 aaPredicted RBP10.53□□□□□ -0.72
CHD4-212ENST00000545083 ANO5Q75V66 913 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 MIER3Q7Z3K6 550 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 ZNF579Q8NAF0 562 aaKnown RBP10.53□□□□□ -0.72
CHD4-212ENST00000545083 RABGGTAQ92696 567 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 RIT2Q99578 217 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 TEKT3Q9BXF9 490 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 FNIP2Q9P278 1114 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 FBXW11Q9UKB1 542 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 GMEB2Q9UKD1 530 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 IPPQ9Y573 584 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 COL4A3BPQ9Y5P4 624 aa10.53□□□□□ -0.72
CHD4-212ENST00000545083 MTCL1Q9Y4B5 1905 aaKnown RBP10.52□□□□□ -0.72
CHD4-212ENST00000545083 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.52□□□□□ -0.73
CHD4-212ENST00000545083 DDX11L8A8MPP1 907 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 ITGA4P13612 1032 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 ADD1P35611 737 aaKnown RBP10.52□□□□□ -0.73
CHD4-212ENST00000545083 MAGEA9P43362 315 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 NPEPPSP55786 919 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 EXOSC10Q01780 885 aaKnown RBP10.52□□□□□ -0.73
CHD4-212ENST00000545083 MTAPQ13126 283 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 USP41Q3LFD5 358 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 RTP2Q5QGT7 225 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 TPRG1Q6ZUI0 275 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 GSTCDQ8NEC7 633 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 NETO1Q8TDF5 533 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 CCDC136Q96JN2 1154 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 PLA2G2FQ9BZM2 168 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 C6orf50Q9HD87 102 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
CHD4-212ENST00000545083 CACNG4Q9UBN1 327 aa10.52□□□□□ -0.73
CHD4-212ENST00000545083 FASNP49327 2511 aaKnown RBP10.52□□□□□ -0.73
CHD4-212ENST00000545083 KLF18A0A0U1RQI7 1052 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 CCL16O15467 120 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 GDF9O60383 454 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 SRGAP2CP0DJJ0 459 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 RPS9P46781 194 aaKnown RBP10.51□□□□□ -0.73
CHD4-212ENST00000545083 PFKPQ01813 784 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 MTSS1LQ765P7 747 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 SRGAP1Q7Z6B7 1085 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 NPAS3Q8IXF0 933 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 GPR65Q8IYL9 337 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 ZNF687Q8N1G0 1237 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 RDM1Q8NG50 284 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 PRPF31Q8WWY3 499 aaKnown RBP10.51□□□□□ -0.73
CHD4-212ENST00000545083 TMEM143Q96AN5 459 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 CLSTN3Q9BQT9 956 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 PHF20Q9BVI0 1012 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 COLEC11Q9BWP8 271 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 APOL6Q9BWW8 343 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 HEBP1Q9NRV9 189 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 BMP2KQ9NSY1 1161 aaPredicted RBP10.51□□□□□ -0.73
CHD4-212ENST00000545083 HCFC1R1Q9NWW0 138 aa10.51□□□□□ -0.73
CHD4-212ENST00000545083 ANKRD11Q6UB99 2663 aaPredicted RBP10.51□□□□□ -0.73
CHD4-212ENST00000545083 ZZEF1O43149 2961 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 ADAM12O43184 909 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 TSPAN1O60635 241 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 TDP2O95551 362 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 C8AP07357 584 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 HNRNPA1P09651 372 aaKnown RBP eCLIP10.5□□□□□ -0.73
CHD4-212ENST00000545083 LAMTOR4Q0VGL1 99 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 COL9A2Q14055 689 aaPredicted RBP10.5□□□□□ -0.73
CHD4-212ENST00000545083 LAIR1Q6GTX8 287 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 CNNM3Q8NE01 707 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 ING5Q8WYH8 240 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 CPB2Q96IY4 423 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 NELL2Q99435 816 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 PAAF1Q9BRP4 392 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 FAM126AQ9BYI3 521 aaPredicted RBP10.5□□□□□ -0.73
CHD4-212ENST00000545083 UBN1Q9NPG3 1134 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 SEMA4GQ9NTN9 838 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 WRAP73Q9P2S5 460 aaPredicted RBP10.5□□□□□ -0.73
CHD4-212ENST00000545083 DNMT3BQ9UBC3 853 aaKnown RBP10.5□□□□□ -0.73
CHD4-212ENST00000545083 ADAM28Q9UKQ2 775 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 POLIQ9UNA4 740 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 NOTCH4Q99466 2003 aa10.5□□□□□ -0.73
CHD4-212ENST00000545083 EML1O00423 815 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 RETP07949 1114 aa10.49□□□□□ -0.73
CHD4-212ENST00000545083 HOXB3P14651 431 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms