RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 AKAP3O75969 853 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 TFRCP02786 760 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 CD58P19256 250 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 FECHP22830 423 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 ZNF131P52739 623 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 KRT17Q04695 432 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 ECM1Q16610 540 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 CRY2Q49AN0 593 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 RASIP1Q5U651 963 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 TMEM270Q6UE05 265 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 PASD1Q8IV76 773 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 GDAP1Q8TB36 358 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 LRRC8CQ8TDW0 803 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 DCPSQ96C86 337 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 MTMR8Q96EF0 704 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 TMEM8AQ9HCN3 771 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 TMX2Q9Y320 296 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 RNF225M0QZC1 329 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 HGSO14964 777 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 OSBPP22059 807 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 RFC1P35251 1148 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 NBPF9Q3BBW0 867 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 HYIQ5T013 277 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 SCARA5Q6ZMJ2 495 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 MSL3Q8N5Y2 521 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 DNAJC19Q96DA6 116 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 MOV10L1Q9BXT6 1211 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 TRIM6Q9C030 488 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 THAP2Q9H0W7 228 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 GOLPH3Q9H4A6 298 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 ACAD9Q9H845 621 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 JPH1Q9HDC5 661 aaPredicted RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 HOXC10Q9NYD6 342 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 MAP3K20Q9NYL2 800 aaKnown RBP6.18□□□□□ -1.42
VPS50-220ENST00000544910 STK38LQ9Y2H1 464 aa6.18□□□□□ -1.42
VPS50-220ENST00000544910 RCCD1A6NED2 376 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 ARP10275 920 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 HSD17B3P37058 310 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 TPD52P55327 224 aaPredicted RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 TFAMQ00059 246 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 KCNMA1Q12791 1236 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 COG2Q14746 738 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 LLGL1Q15334 1064 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 TKFCQ3LXA3 575 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 ZNF720Q7Z2F6 126 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 IRF2BP1Q8IU81 584 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 APOBEC3FQ8IUX4 373 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 ZFPM1Q8IX07 1006 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 HAUS1Q96CS2 278 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 FAM167AQ96KS9 214 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 PRMT6Q96LA8 375 aaPredicted RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 TMEM39BQ9GZU3 492 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 TSPYL2Q9H2G4 693 aaPredicted RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 SYNPO2Q9UMS6 1093 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 STRCP1A6NGW2 1772 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 SPDYE2BA6NHP3 402 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 BTNL10A8MVZ5 291 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 PPFIA2O75334 1257 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 PPP1R37O75864 691 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 RNF8O76064 485 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 ABL1P00519 1130 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 SPDYE6P0CI01 402 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 SNHG28P0DPA3 235 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 MAPTP10636 758 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 FGFR4P22455 802 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 GUCY2CP25092 1073 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 GPC3P51654 580 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 AP3M2P53677 418 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 IGBP1P78318 339 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 KCTD2Q14681 263 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 CFAP157Q5JU67 520 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 PCNX4Q63HM2 1172 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 PLA2G4FQ68DD2 849 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 SCYL2Q6P3W7 929 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 JAMLQ86YT9 394 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 CERS5Q8N5B7 392 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 KCTD6Q8NC69 237 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 GLIS3Q8NEA6 775 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 SNED1Q8TER0 1413 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 BAP1Q92560 729 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 WRNIP1Q96S55 665 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 NCAPGQ9BPX3 1015 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 FRMPD4Q14CM0 1322 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 M0R2N6 131 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 MCF2LO15068 1137 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 ADAMTS3O15072 1205 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 HNRNPH3P31942 346 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 CAP2P40123 477 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 DYNLT1P63172 113 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 FAM133BQ5BKY9 247 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 ERICH1Q86X53 443 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 RDM1Q8NG50 284 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 OR2W6PQ8NHA6 318 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 ACER1Q8TDN7 264 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 C1orf54Q8WWF1 131 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 SHISA4Q96DD7 197 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 C11orf70Q9BRQ4 267 aa6.17□□□□□ -1.42
VPS50-220ENST00000544910 CELF4Q9BZC1 486 aaKnown RBP6.17□□□□□ -1.42
VPS50-220ENST00000544910 TMBIM4Q9HC24 238 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms