RNA–Protein interactions for RNA: ENST00000544755.1

PDCD2-212, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-212ENST00000544755 CCDC65Q8IXS2 484 aa16.74■□□□□ 0.27
PDCD2-212ENST00000544755 KLHL23Q8NBE8 558 aa16.74■□□□□ 0.27
PDCD2-212ENST00000544755 LRRC15Q8TF66 581 aa16.74■□□□□ 0.27
PDCD2-212ENST00000544755 TMEM169Q96HH4 297 aa16.74■□□□□ 0.27
PDCD2-212ENST00000544755 TCHPQ9BT92 498 aa16.74■□□□□ 0.27
PDCD2-212ENST00000544755 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
PDCD2-212ENST00000544755 NXF3Q9H4D5 531 aaKnown RBP16.74■□□□□ 0.27
PDCD2-212ENST00000544755 NSUN3Q9H649 340 aaKnown RBP16.74■□□□□ 0.27
PDCD2-212ENST00000544755 POLD4Q9HCU8 107 aa16.74■□□□□ 0.27
PDCD2-212ENST00000544755 OLFML3Q9NRN5 406 aa16.74■□□□□ 0.27
PDCD2-212ENST00000544755 NPHP3-ACAD11A0A0J9YXS1 232 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 ARL5CA6NH57 179 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 ZC3H11AO75152 810 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDCD2-212ENST00000544755 ITGB1P05556 798 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 YARSP54577 528 aaKnown RBP16.73■□□□□ 0.27
PDCD2-212ENST00000544755 GTF2BQ00403 316 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 E2F4Q16254 413 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 NT5DC1Q5TFE4 455 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 LRRC55Q6ZSA7 311 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 CEP57L1Q8IYX8 460 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 SPPL3Q8TCT6 385 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
PDCD2-212ENST00000544755 DHX58Q96C10 678 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 BICD1Q96G01 975 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 GAD1Q99259 594 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 PARP2Q9UGN5 583 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 KCNH3Q9ULD8 1083 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 TBX20Q9UMR3 447 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 COG5Q9UP83 839 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 EXOC7Q9UPT5 735 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 PLXNA4Q9HCM2 1894 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 CHD7Q9P2D1 2997 aa16.73■□□□□ 0.27
PDCD2-212ENST00000544755 CITO14578 2027 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 A0A1W2PQ27 194 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 A0A1W2PQ64 194 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 A0A1W2PQD8 194 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 FRMD3A2A2Y4 597 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 MYMKA6NI61 221 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 HNRNPDLO14979 420 aaKnown RBP16.72■□□□□ 0.27
PDCD2-212ENST00000544755 POLR2DO15514 142 aaKnown RBP16.72■□□□□ 0.27
PDCD2-212ENST00000544755 CLDN3O15551 220 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 PIGRP01833 764 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 ALDH2P05091 517 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 MYL1P05976 194 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 PROZP22891 400 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 MLH1P40692 756 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 GRM5P41594 1212 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 LIG4P49917 911 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 BCAR1P56945 870 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 NOLC1Q14978 699 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDCD2-212ENST00000544755 AAK1Q2M2I8 961 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 DYMQ7RTS9 669 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 TAS1R3Q7RTX0 852 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 SLC39A11Q8N1S5 342 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 DNAJC19Q96DA6 116 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 TARS2Q9BW92 718 aaKnown RBP16.72■□□□□ 0.27
PDCD2-212ENST00000544755 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 PTPRHQ9HD43 1115 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 NGRNQ9NPE2 291 aaKnown RBP16.72■□□□□ 0.27
PDCD2-212ENST00000544755 TLR9Q9NR96 1032 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 PCDHB13Q9Y5F0 798 aa16.72■□□□□ 0.27
PDCD2-212ENST00000544755 A0A087X0B3 334 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 MEIS3P2A8K0S8 358 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 GRM6O15303 877 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 RECQL4O94761 1208 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 IDEP14735 1019 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 CACNB1Q02641 598 aaPredicted RBP16.71■□□□□ 0.27
PDCD2-212ENST00000544755 LONRF3Q496Y0 759 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 SLFN12LQ6IEE8 588 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 CDR2LQ86X02 465 aaPredicted RBP16.71■□□□□ 0.27
PDCD2-212ENST00000544755 MAP4K3Q8IVH8 894 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 MICALL1Q8N3F8 863 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 POF1BQ8WVV4 589 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 TSPAN18Q96SJ8 248 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 APOL6Q9BWW8 343 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 TRIM9Q9C026 710 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 CDT1Q9H211 546 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 NRDE2Q9H7Z3 1164 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 MRPL44Q9H9J2 332 aaKnown RBP16.71■□□□□ 0.27
PDCD2-212ENST00000544755 ALG13Q9NP73 1137 aaKnown RBP16.71■□□□□ 0.27
PDCD2-212ENST00000544755 PANK4Q9NVE7 773 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 HES2Q9Y543 173 aa16.71■□□□□ 0.27
PDCD2-212ENST00000544755 GOLGA6L4A6NEF3 574 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 TTLL13PA6NNM8 815 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 RBAK-RBAKDNI3L0D1 243 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 THP07101 528 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 GALTP07902 379 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 SLFN14P0C7P3 912 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 MCL1Q07820 350 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 DSC1Q08554 894 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 HERC4Q5GLZ8 1057 aaPredicted RBP16.7■□□□□ 0.26
PDCD2-212ENST00000544755 EEF1DP3Q658K8 133 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 ZNF720Q7Z2F6 126 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 SFR1Q86XK3 245 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 ACAP3Q96P50 834 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 CDCA3Q99618 268 aaPredicted RBP16.7■□□□□ 0.26
PDCD2-212ENST00000544755 C7orf25Q9BPX7 421 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 SLC38A7Q9NVC3 462 aa16.7■□□□□ 0.26
PDCD2-212ENST00000544755 SNTG2Q9NY99 539 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms