RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 BICD1Q96G01 975 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 APOL6Q9BWW8 343 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 HAPLN2Q9GZV7 340 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 TMEM117Q9H0C3 514 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 MRPL42Q9Y6G3 142 aaKnown RBP16.55■□□□□ 0.24
CD9-210ENST00000543916 CHD7Q9P2D1 2997 aa16.55■□□□□ 0.24
CD9-210ENST00000543916 TDRD15B5MCY1 1934 aaKnown RBP16.55■□□□□ 0.24
CD9-210ENST00000543916 TMEM265A0A087WTH1 108 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 TISP43B9A030 160 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 ANKRD63C9JTQ0 380 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 HNRNPDLO14979 420 aaKnown RBP16.54■□□□□ 0.24
CD9-210ENST00000543916 OFD1O75665 1012 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 TOM1L1O75674 476 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 RPN1P04843 607 aaKnown RBP16.54■□□□□ 0.24
CD9-210ENST00000543916 AKAP5P24588 427 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 AFF1P51825 1210 aaKnown RBP16.54■□□□□ 0.24
CD9-210ENST00000543916 PNOCQ13519 176 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 POSTNQ15063 836 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 KMT5BQ4FZB7 885 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 ZNF697Q5TEC3 545 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 KANK3Q6NY19 840 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 EPM2AIP1Q7L775 607 aaPredicted RBP16.54■□□□□ 0.24
CD9-210ENST00000543916 ABI1Q8IZP0 508 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 CEP120Q8N960 986 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 TIGD1Q96MW7 591 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 GBP4Q96PP9 640 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 C17orf80Q9BSJ5 609 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 ZNF576Q9H609 170 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 RSAD1Q9HA92 442 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 ANKFY1Q9P2R3 1169 aa16.54■□□□□ 0.24
CD9-210ENST00000543916 ZMYM2Q9UBW7 1377 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 PRPF6O94906 941 aaKnown RBP16.53■□□□□ 0.24
CD9-210ENST00000543916 MCF2P10911 925 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 HARSP12081 509 aaKnown RBP16.53■□□□□ 0.24
CD9-210ENST00000543916 LIG4P49917 911 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 MCL1Q07820 350 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 ALCAMQ13740 583 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 NOLC1Q14978 699 aaKnown RBP eCLIP16.53■□□□□ 0.24
CD9-210ENST00000543916 GLB1LQ6UWU2 654 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 LRRC55Q6ZSA7 311 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 TMEM192Q8IY95 271 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 FAM161BQ96MY7 647 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 ACCSQ96QU6 501 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 TCHPQ9BT92 498 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 CWH43Q9H720 699 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 CERS4Q9HA82 394 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 SLC39A2Q9NP94 309 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 LMBRD1Q9NUN5 540 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 EXOC1Q9NV70 894 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 SNTG2Q9NY99 539 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 INPP5FQ9Y2H2 1132 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 PCDHB13Q9Y5F0 798 aa16.53■□□□□ 0.24
CD9-210ENST00000543916 SZT2Q5T011 3432 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 PDCD11Q14690 1871 aaKnown RBP16.52■□□□□ 0.24
CD9-210ENST00000543916 CLDN3O15551 220 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 KINO60870 393 aaKnown RBP16.52■□□□□ 0.24
CD9-210ENST00000543916 HOXD13P35453 343 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 MLH1P40692 756 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 GRM5P41594 1212 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 ERVK-21P61565 698 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 NOMO2Q5JPE7 1267 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 APBB1IPQ7Z5R6 666 aaPredicted RBP16.52■□□□□ 0.24
CD9-210ENST00000543916 HACE1Q8IYU2 909 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 ERCC4Q92889 916 aaPredicted RBP16.52■□□□□ 0.24
CD9-210ENST00000543916 CLP1Q92989 425 aaKnown RBP16.52■□□□□ 0.24
CD9-210ENST00000543916 ZFP42Q96MM3 310 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 TGS1Q96RS0 853 aaKnown RBP16.52■□□□□ 0.24
CD9-210ENST00000543916 CXCL16Q9H2A7 254 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 SEMA6BQ9H3T3 888 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 UBN1Q9NPG3 1134 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 TYW1Q9NV66 732 aaKnown RBP16.52■□□□□ 0.24
CD9-210ENST00000543916 KLK14Q9P0G3 267 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 PARP2Q9UGN5 583 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 MTUS1Q9ULD2 1270 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 GDAQ9Y2T3 454 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 GIT1Q9Y2X7 761 aa16.52■□□□□ 0.24
CD9-210ENST00000543916 PLXNA4Q9HCM2 1894 aa16.52■□□□□ 0.23
CD9-210ENST00000543916 TRANK1O15050 2925 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 ARL5CA6NH57 179 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 EPOPA6NHQ4 379 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 INPPL1O15357 1258 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 EIF3DO15371 548 aaKnown RBP eCLIP16.51■□□□□ 0.23
CD9-210ENST00000543916 RECQL4O94761 1208 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.23
CD9-210ENST00000543916 OSTNP61366 133 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 STK4Q13043 487 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 SEZ6Q53EL9 994 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 STXBP4Q6ZWJ1 553 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 THNSL1Q8IYQ7 743 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 LRRC43Q8N309 656 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 DEFB123Q8N688 67 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 KIAA0895Q8NCT3 520 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 ZNF507Q8TCN5 953 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 SCFD1Q8WVM8 642 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 ARNTL2Q8WYA1 636 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 CCDC34Q96HJ3 373 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 GAD1Q99259 594 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 TBC1D13Q9NVG8 400 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 MIOSQ9NXC5 875 aa16.51■□□□□ 0.23
CD9-210ENST00000543916 EXOC7Q9UPT5 735 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms